Caproicibacterium species ZCY20-5 |
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Putative Caproicibacterium species ZCY20-5 RM systems
Ref: Xia,S. unpublished
REBASE ref # 37636
Complete sequence: 2,904,997 bp
GenBank #: CP135996
REBASE acronym: Csp05
Org_num: 72136
All begin PXC00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11705 | DUF1837 domain-containing protein | |||
| 11710 | R | Pde20019ORF3634P (91% identity) | Csp05ORF11735P | |
| 11715 | S | S.GvaB477ORF2573P (43% identity) | S2.Csp05ORF11735P | |
| 11720 | tyrosine-type recombinase/integrase | |||
| 11725 | 115 aa hypothetical protein | |||
| 11730 | S | S1.CsySt66ORF5040P (41% identity) | S1.Csp05ORF11735P | |
| 11735 | M | M.RspP328ORFBP (94% identity) | M.Csp05ORF11735P | |
| 11740 | helix-turn-helix domain-containing protein | |||
| 12020 | AAA family ATPase | |||
| 12025 | R | PmeBin36ORFEP (85% identity) | Csp05ORF12035P | |
| 12030 | S | S.PmeBin36ORFEP (48% identity) | S.Csp05ORF12035P | |
| 12035 | M | M.PmeBin36ORFEP (83% identity) | M.Csp05ORF12035P | |
| 12040 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5365 | phosphotransferase | |||
| 5370 | RM | Oba18003ORF9045P (80% identity) | Csp05ORF5370P | |
| 5375 | O-antigen polysaccharide polymerase Wzy family | |||
| 5660 | TnpV protein | |||
| 5665 | M | M.PmeBin574ORFAP (80% identity) | M.Csp05ORF5665P | |
| 5670 | R | CleDORF3217P (94% identity) | Csp05ORF5665P | |
| 5675 | 286 aa hypothetical protein | |||
| 7550 | 68 aa hypothetical protein | |||
| 7555 | M | M.Rba19011ORF7745P (99% identity) | M.Csp05ORF7555P | |
| 7560 | AbrB/MazE/SpoVT family DNA-binding | |||
| 7675 | DUF4406 domain-containing protein | |||
| 7680 | M | M.Csp12ORFCP (97% identity) | M.Csp05ORF7680P | |
| 7685 | 103 aa hypothetical protein | |||
| 11830 | terminase | |||
| 11835 | M | M.Rba19010ORF9050P (96% identity) | M1.Csp05ORF11835P | |
| 11840 | M | M1.Efa4ORF1624P (85% identity) | M2.Csp05ORF11835P | |
| 11845 | 94 aa hypothetical protein | |||
| 12130 | terminase | |||
| 12135 | M | M.Rba19010ORF1035P (100% identity) | M.Csp05ORF12135P | |
| 12140 | virulence protein | |||
| 12220 | recombinase family protein | |||
| 12225 | RM | Rba19011ORF3215BP (97% identity) | Csp05ORF12225BP | |
| 12230 | RM | Rba19011ORF3215AP (79% identity) | Csp05ORF12225AP | |
| 12235 | helix-turn-helix domain-containing protein | |||
| 12875 | 216 aa hypothetical protein | |||
| 12880 | RM | AwiYORF10075P (51% identity) | Csp05ORF12880P | |
| 12885 | site-specific DNA-methyltransferase | |||
| 13190 | 138 aa hypothetical protein | |||
| 13195 | M | M.CspNJN50ORF15135P (87% identity) | M.Csp05ORF13195P | |
| 13200 | 193 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12880 | N-6 DNA methylase | |||
| 12885 | M | M.BvuVIC01ORF1755P (64% identity) | M.Csp05ORF12885P | |
| 12890 | R | Ava7778AORF215P (71% identity) | Csp05ORF12885P | |
| 12895 | helix-turn-helix transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12010 | 786 aa hypothetical protein | |||
| 12015 | R | Bga20093McrCP (79% identity) | Csp05McrCP | |
| 12020 | R | StuCT001McrBP (74% identity) | Csp05McrBP | |
| 12025 | DEAD/DEAH box helicase family protein | |||