Salmonella enterica QT6365 |
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Putative Salmonella enterica QT6365 RM systems
Ref: Sun,Y. unpublished
REBASE ref # 32922
| Sequence length: | GenBank #: | |
| Chromosome: | 4,783,748 bp | CP103966 |
| plasmid pQT6365: | 216,988 bp | CP103967 |
REBASE acronym: Sen65
Org_num: 72341
All begin NY001_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen65DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen65ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9245 | phosphohydrolase | |||
| 9250 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen65DcmP |
| 9255 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.Sen65DcmP |
| 9260 | drug/metabolite exporter YedA | |||
| 17960 | regulator | |||
| 17965 | M | M.SenSI196ORF17850P (100% identity) | M1.Sen65ORF17965P | |
| 17970 | M | M.SenSI196ORF17855P (100% identity) | GATC | M2.Sen65ORF17965P |
| 17975 | 74 aa hypothetical protein | |||
| 20145 | YebC/PmpR family DNA-binding transcriptional | |||
| 20150 | R | Sensp14178ORF19855P (100% identity) | Sen65ORF20150P | |
| 20155 | DUF2220 domain-containing protein | |||
| 20190 | TnsA endonuclease N-terminal domain-containing | |||
| 20195 | R | SenV2ORF20065P (100% identity) | Sen65ORF20195P | |
| 20200 | malate transporter | |||
| plasmid pQT6365 | ||||
| 23555 | 55 aa hypothetical protein | |||
| 23560 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen65ORF23560P |
| 23565 | thermonuclease family protein | |||
| 24420 | DNA-binding protein | |||
| 24425 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen65ORF24425P |
| 24430 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17195 | small effector SsaA | |||
| 17200 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen65ORF17205P |
| 17205 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.Sen65ORF17205P |
| 17210 | MFS transporter | |||
| 20230 | S8 family peptidase | |||
| 20235 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.Sen65ORF20235P |
| 20240 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | Sen65ORF20235P |
| 20245 | integrase arm-type DNA-binding domain-containing | |||