Salmonella enterica subsp. enterica serovar Thompson JNQH950 |
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Putative Salmonella enterica subsp. enterica serovar Thompson JNQH950 RM systems
Ref: Hao,M. unpublished
REBASE ref # 32044
| Sequence length: | GenBank #: | |
| Chromosome: | 4,761,094 bp | CP136146 |
| plasmid pJNQH950-1: | 111,466 bp | CP136147 |
REBASE acronym: SenH950
Org_num: 72347
All begin RVN05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19730 | 322 aa hypothetical protein | |||
| 19735 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | SenH950ORF19740P |
| 19740 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.SenH950ORF19740P |
| 19745 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.SenH950ORF19740P |
| 19750 | ISL3-like element ISKox3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1915 | cell division protein DamX | |||
| 1920 | M | M.StyTDamP (100% identity) | GATC | M.SenH950DamP |
| 1925 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenH950ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 9290 | phosphohydrolase | |||
| 9295 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenH950DcmP |
| 9300 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenH950DcmP |
| 9305 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17410 | small effector SsaA | |||
| 17415 | R | Ssp15303ORFGP (99% identity) | CAGAG | SenH950ORF17420P |
| 17420 | M | M.Spy5740II (100% identity) | CAGAG | M.SenH950ORF17420P |
| 17425 | MFS transporter | |||
| plasmid pJNQH950-1 | ||||
| 23210 | 69 aa hypothetical protein | |||
| 23215 | M | M.SenSP5ORF35P (100% identity) | M.SenH950ORF23215P | |
| 23220 | R | SenSP5ORF35P (100% identity) | SenH950ORF23215P | |
| 23225 | IS3-like element ISSen4 family transposase | |||