Salmonella enterica subsp. enterica serovar Enteritidis JNQH952 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis JNQH952 RM systems
Ref: Hao,M. unpublished
REBASE ref # 32044
Complete sequence: 4,679,799 bp
GenBank #: CP136149
REBASE acronym: Sen952
Org_num: 72344
All begin RVN04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19480 | NERD domain-containing protein/DEAD/DEAH box | |||
| 19485 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.Sen952ORF19485P |
| 19490 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen952ORF19485P |
| 19495 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen952ORF19485P |
| 19500 | DUF5655 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen952DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen952ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8925 | PerC family transcriptional regulator | |||
| 8930 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen952ORF8930P |
| 8935 | RusA family crossover junction | |||
| 13855 | drug/metabolite exporter YedA | |||
| 13860 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen952DcmP |
| 13865 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen952DcmP |
| 13870 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17400 | small effector SsaA | |||
| 17405 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen952ORF17410P |
| 17410 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen952ORF17410P |
| 17415 | MFS transporter | |||