Salmonella enterica subsp. enterica serovar Mbandaka JNQH948 |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka JNQH948 RM systems
Ref: Hao,M. unpublished
REBASE ref # 32044
Complete sequence: 4,724,939 bp
GenBank #: CP136145
REBASE acronym: Sen48
Org_num: 72346
All begin RVN06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19395 | 322 aa hypothetical protein | |||
| 19400 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen48ORF19405P |
| 19405 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen48ORF19405P |
| 19410 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen48ORF19405P |
| 19415 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.Sen48DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen48ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5385 | zinc ribbon domain-containing protein | |||
| 5390 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen48ORF5390P |
| 5395 | 470 aa hypothetical protein | |||
| 5445 | TraR/DksA family transcriptional regulator | |||
| 5450 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen48ORF5450P |
| 5455 | replication endonuclease | |||
| 9320 | phosphohydrolase | |||
| 9325 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen48DcmP |
| 9330 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen48DcmP |
| 9335 | drug/metabolite exporter YedA | |||
| 19555 | response regulator receiver domain | |||
| 19560 | R | SenXB08ORF19940P (100% identity) | Sen48ORF19560P | |
| 19565 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17095 | small effector SsaA | |||
| 17100 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen48ORF17105P |
| 17105 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen48ORF17105P |
| 17110 | MFS transporter | |||