Citrobacter freundii CPO20180081 |
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Putative Citrobacter freundii CPO20180081 RM systems
Ref: Roer,L. unpublished
REBASE ref # 37638
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,900 bp | CP136047 |
| plasmid pCPO20180081_1: | 226,955 bp | CP136048 |
| plasmid pCPO20180081_2: | 157,885 bp | CP136049 |
| plasmid pCPO20180081_3: | 110,089 bp | CP136050 |
REBASE acronym: Cfr1
Org_num: 72140
All begin RU414_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4810 | anti-phage protein KwaA | |||
| 4815 | R | Sma95ORF3770P (100% identity) | GTAYNNNNGTG | Cfr1ORF4825P |
| 4820 | S | S.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | S.Cfr1ORF4825P |
| 4825 | M | M.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | M.Cfr1ORF4825P |
| 4830 | IS3 family transposase | |||
| 12065 | N-6 DNA methylase | |||
| 12070 | R | CfrGORF11545P (100% identity) | Cfr1ORF12070P | |
| 12075 | translesion error-prone DNA polymerase V | |||
| 15845 | ISL3-like element ISKpn25 family transposase | |||
| 15850 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | Cfr1ORF15860P |
| 15855 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.Cfr1ORF15860P |
| 15860 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.Cfr1ORF15860P |
| 15865 | porin OmpF | |||
| 20925 | restriction endonuclease | |||
| 20930 | R | CfrGORF20560P (100% identity) | Cfr1ORF20935P | |
| 20935 | M | M.CfrGORF20560P (100% identity) | M.Cfr1ORF20935P | |
| ??? | S | S.CfrGORF20560P (100% identity) | S.Cfr1ORF20935P | |
| 20950 | endoribonuclease SymE | |||
| plasmid pCPO20180081_2 | ||||
| 26070 | oxacillin-hydrolyzing class D beta-lactamase | |||
| 26075 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.Cfr1ORF26075P |
| 26080 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.Cfr1ORF26075P |
| 26085 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | Cfr1ORF26075P |
| 26090 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1655 | cell division protein DamX | |||
| 1660 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr1DamP |
| 1665 | ribulose-phosphate 3-epimerase | |||
| 2200 | DUF2556 family protein | |||
| 2205 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr1ORF2205P |
| 2210 | DNA-binding transcriptional regulator Fis | |||
| 9295 | phosphohydrolase | |||
| 9300 | M | M.CfrHM38III (100% identity) | CCWGG | M.Cfr1DcmP |
| 9305 | V | V.CfrL75DcmP (100% identity) | V.Cfr1DcmP | |
| 9310 | drug/metabolite exporter YedA | |||
| 9780 | 180 aa hypothetical protein | |||
| 9785 | M | M.Csp944ORF10665P (100% identity) | M.Cfr1ORF9785P | |
| 9790 | 114 aa hypothetical protein | |||
| 9840 | conserved phage C-terminal domain-containing | |||
| 9845 | M | M.CfrB38ORF1058P (99% identity) | M1.Cfr1ORF9845P | |
| 9850 | M | M.CfrB38ORF1059P (100% identity) | M2.Cfr1ORF9845P | |
| 9855 | RusA family crossover junction | |||
| 10330 | 85 aa hypothetical protein | |||
| 10335 | M | M.CbrA3ORFJP (92% identity) | M.Cfr1ORF10335P | |
| 10340 | 60 aa hypothetical protein | |||
| 11300 | 97 aa hypothetical protein | |||
| 11305 | M | M.CfrGORF10785P (100% identity) | M.Cfr1ORF11305P | |
| 11310 | 72 aa hypothetical protein | |||
| 14650 | 40 aa hypothetical protein | |||
| 14670 | M | M.CfrGORF14110P (100% identity) | M.Cfr1ORF14670P | |
| 14675 | 264 aa hypothetical protein | |||
| plasmid pCPO20180081_1 | ||||
| 24920 | 55 aa hypothetical protein | |||
| 24925 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Cfr1ORF24925P |
| 24930 | thermonuclease family protein | |||
| 25255 | 106 aa hypothetical protein | |||
| 25260 | M | M.Ssp15303ORFDP (100% identity) | M.Cfr1ORF25260P | |
| 25265 | 202 aa hypothetical protein | |||
| 25385 | DNA-binding protein | |||
| 25390 | M | M.Ssp15303ORFEP (95% identity) | M.Cfr1ORF25390P | |
| 25395 | 277 aa hypothetical protein | |||
| plasmid pCPO20180081_2 | ||||
| 25635 | 120 aa hypothetical protein | |||
| 25640 | M | M.Vch11614ORFCP (100% identity) | M.Cfr1ORF25640P | |
| 25645 | 149 aa hypothetical protein | |||
| 26145 | endonuclease III | |||
| 26150 | M | M.SfrTF18ORF14295P (100% identity) | M.Cfr1ORF26150P | |
| 26155 | CopG family transcriptional regulator | |||
| plasmid pCPO20180081_3 | ||||
| 26900 | 76 aa hypothetical protein | |||
| 26905 | M | M.CfrGORF25495P (100% identity) | M.Cfr1ORF26905P | |
| 26910 | 280 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20920 | GTPase | |||
| 20925 | R | Cfr5125MrrP (100% identity) | Cfr1MrrP | |
| 20930 | type I restriction-modification system | |||