Escherichia coli TUM14668 |
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Putative Escherichia coli TUM14668 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,829,602 bp | CP135646 |
| plasmid pMTY14668_IncF: | 147,576 bp | CP135647 |
| plasmid pMTY14668_IncI: | 86,199 bp | CP135648 |
REBASE acronym: Eco4668
Org_num: 72191
All begin RS172_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17815 | type IV toxin-antitoxin system AbiEi family | |||
| 17820 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco4668ORF17825P |
| 17825 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco4668ORF17825P |
| 17830 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco4668ORF17825P |
| 17835 | ash family protein | |||
| plasmid pMTY14668_IncF | ||||
| 23565 | type II toxin-antitoxin system Phd/YefM family | |||
| 23570 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco4668ORF23570P |
| 23575 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.Eco4668ORF23570P |
| 23580 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco4668ORF23570P |
| 23585 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4668DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco4668ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 9645 | phosphohydrolase | |||
| 9650 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco4668DcmP |
| 9655 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco4668DcmP |
| 9660 | drug/metabolite exporter YedA | |||
| 19760 | McrC family protein | |||
| 19765 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco4668ORF19770P |
| 19770 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco4668ORF19770P |
| 19775 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco4668ORF19770P |
| 19780 | helix-turn-helix domain-containing protein | |||
| 20050 | 174 aa hypothetical protein | |||
| 20055 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco4668ORF20055P |
| 20060 | ATP-binding protein | |||
| plasmid pMTY14668_IncF | ||||
| 23635 | 103 aa hypothetical protein | |||
| 23640 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco4668ORF23640P |
| 23645 | 73 aa hypothetical protein | |||
| plasmid pMTY14668_IncI | ||||
| 24260 | 103 aa hypothetical protein | |||
| 24265 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco4668ORF24265P | |
| 24270 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19750 | glycosyltransferase family 2 protein | |||
| 19755 | R | EcosS3McrBP (100% identity) | Eco4668McrBP | |
| 19760 | R | EcosS9McrCP (100% identity) | Eco4668McrCP | |
| 19765 | Alw26I/Eco31I/Esp3I family type II restriction | |||