Citrobacter freundii isolateL |
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Putative Citrobacter freundii isolateL RM systems
Ref: Lerminiaux,N. et al. unpublished
REBASE ref # 37599
| Sequence length: | GenBank #: | |
| Chromosome: | 5,016,448 bp | CP135450 |
| plasmid pIsolateL_A: | 255,430 bp | CP135451 |
| plasmid pIsolateL_B: | 85,586 bp | CP135452 |
REBASE acronym: CfrL
Org_num: 72141
All begin RRL10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20540 | restriction endonuclease | |||
| 20545 | R | CfrPSVORF4296P (99% identity) | CfrLORF20550P | |
| 20550 | M | M.CfrMH15I (98% identity) | M.CfrLORF20550P | |
| 20555 | S | S.Sen51958I (70% identity) | S.CfrLORF20550P | |
| 20560 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1945 | cell division protein DamX | |||
| 1950 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrLDamP |
| 1955 | ribulose-phosphate 3-epimerase | |||
| 2490 | DUF2556 family protein | |||
| 2495 | M | M.CspMGH103ORFEP (100% identity) | ATGCAT | M.CfrLORF2495P |
| 2500 | site-specific integrase | |||
| 6090 | conserved phage C-terminal domain-containing | |||
| 6095 | M | M.CfrMH19ORF10710P (96% identity) | M.CfrLORF6095P | |
| 6100 | RusA family crossover junction | |||
| 9205 | IS1-like element IS1B family transposase | |||
| 9210 | M | M.SenRM019ORF21445P (79% identity) | M.CfrLORF9210P | |
| 9215 | replication endonuclease | |||
| 9970 | phosphohydrolase | |||
| 9975 | M | M.CfrE51ORF9605P (100% identity) | CCWGG | M.CfrLORF9975P |
| 9980 | V | V.CfrMH15ORF11700P (100% identity) | V.CfrLORF9975P | |
| 9985 | drug/metabolite exporter YedA | |||
| 20715 | HNH endonuclease | |||
| 20720 | R | Cfr1016ORF4395P (99% identity) | CfrLORF20720P | |
| 20725 | YaaC family protein | |||
| plasmid pIsolateL_A | ||||
| 24845 | 76 aa hypothetical protein | |||
| 24850 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.CfrLORF24850P |
| 24855 | DNA polymerase III subunit beta | |||
| 25045 | IS1 family transposase | |||
| 25050 | M | M1.Eho5ORF26025P (100% identity) | CCWGG | M.CfrLORF25050P |
| 25055 | R | Sen23701ORF24490P (100% identity) | CCWGG | CfrLORF25050P |
| 25060 | recombinase family protein | |||
| plasmid pIsolateL_B | ||||
| 25855 | EAL domain-containing protein | |||
| 25860 | R | YpsR1ORFAP (100% identity) | CCWGG | CfrLORF25865P |
| 25865 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CfrLORF25865P |
| 25870 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20535 | BrnA antitoxin family protein | |||
| 20540 | R | CfrC05MrrP (99% identity) | CfrLMrrP | |
| 20545 | DEAD/DEAH box helicase family protein | |||