Escherichia coli TUM1223 |
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Putative Escherichia coli TUM1223 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,012,486 bp | CP135722 |
| plasmid pMTY1223_IncF: | 93,037 bp | CP135723 |
| plasmid pMTY1223_IncFII: | 70,302 bp | CP135724 |
REBASE acronym: Eco223
Org_num: 72052
All begin RS156_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7260 | GTPase family protein | |||
| 7265 | M | M.EcosS1ORF17110P (100% identity) | M.Eco223ORF7265P | |
| 7270 | S | S.EcosS1ORF17110P (100% identity) | S.Eco223ORF7265P | |
| 7275 | R | EcosEC2ORF13930P (100% identity) | Eco223ORF7265P | |
| 7280 | 75 aa hypothetical protein | |||
| 11860 | adenine/cytosine-specific restriction | |||
| 11865 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco223ORF11870P |
| 11870 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco223ORF11870P |
| 11875 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco223ORF11870P |
| 11880 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 975 | HD domain-containing protein | |||
| 980 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco223DcmP |
| 985 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco223DcmP |
| 990 | drug/metabolite exporter YedA | |||
| 17240 | cell division protein DamX | |||
| 17245 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco223DamP |
| 17250 | ribulose-phosphate 3-epimerase | |||
| 17770 | DUF2556 family protein | |||
| 17775 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco223ORF17775P |
| 17780 | DNA-binding transcriptional regulator Fis | |||
| plasmid pMTY1223_IncF | ||||
| 24490 | 103 aa hypothetical protein | |||
| 24495 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco223ORF24495P |
| 24500 | 73 aa hypothetical protein | |||
| plasmid pMTY1223_IncFII | ||||
| 24840 | 97 aa hypothetical protein | |||
| 24845 | M | M.Ssop356ORFAP (100% identity) | M.Eco223ORF24845P | |
| 24850 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11855 | GTPase | |||
| 11860 | R | EcosS1MrrP (100% identity) | Eco223MrrP | |
| 11865 | type I restriction-modification system | |||
| 11880 | endoribonuclease SymE | |||
| 11885 | R | EcoUTGmrSD2P (52% identity) | Eco223GmrSDP | |
| 11890 | R | EcoSW4848GmrSDAP (100% identity) | Eco223GmrSP | |
| 11895 | Rpn family recombination-promoting | |||