Escherichia coli TUM1586 |
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Putative Escherichia coli TUM1586 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 5,112,477 bp | CP135712 |
| plasmid pMTY1586_IncF: | 123,062 bp | CP135713 |
| plasmid pMTY1586_IncFII: | 72,746 bp | CP135716 |
| plasmid pMTY1586_IncY: | 96,367 bp | CP135714 |
| plasmid pMTY1586_untypable1: | 93,100 bp | CP135715 |
REBASE acronym: EcoM1586
Org_num: 72054
All begin RS158_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 68 aa hypothetical protein | |||
| 25 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.EcoM1586ORF25P |
| 30 | 345 aa hypothetical protein | |||
| 2155 | 332 aa hypothetical protein | |||
| 2160 | R | EcoXDLORF21295P (100% identity) | EcoM1586ORF2160P | |
| 2165 | HNH endonuclease | |||
| 2205 | DEAD/DEAH box helicase | |||
| 2210 | RM | EcoXDLORF21245P (100% identity) | EcoM1586ORF2210P | |
| 8955 | hydrolase | |||
| 8960 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoM1586DcmP |
| 8965 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoM1586DcmP |
| 8970 | drug/metabolite exporter YedA | |||
| 20675 | DNA-binding transcriptional regulator Fis | |||
| 20680 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.EcoM1586ORF20680P |
| 20685 | DUF2556 family protein | |||
| 21205 | ribulose-phosphate 3-epimerase | |||
| 21210 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM1586DamP |
| 21215 | cell division protein DamX | |||
| plasmid pMTY1586_IncF | ||||
| 25135 | conjugal transfer mating-pair stabilization | |||
| ??? | M | M.EcoP006ORFAP (100% identity) | M.EcoM1586ORF25140P | |
| 25145 | 103 aa hypothetical protein | |||
| plasmid pMTY1586_IncFII | ||||
| 26575 | 97 aa hypothetical protein | |||
| 26580 | M | M.Ssop356ORFAP (100% identity) | M.EcoM1586ORF26580P | |
| 26585 | 73 aa hypothetical protein | |||
| plasmid pMTY1586_IncY | ||||
| 25845 | SPFH domain-containing protein | |||
| 25860 | M | M.Eco3150ORF26245P (99% identity) | M.EcoM1586ORF25860P | |
| 25865 | recombination-associated protein RdgC | |||
| plasmid pMTY1586_untypable1 | ||||
| 26305 | 206 aa hypothetical protein | |||
| ??? | M | M.EcoLD931ORF22925P (100% identity) | M.EcoM1586ORF26310P | |
| 26315 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2485 | DUF1127 domain-containing protein | |||
| ??? | R | EcoSBF22GmrSDP (100% identity) | EcoM1586GmrSDP | |
| 2500 | endoribonuclease SymE | |||