Escherichia coli TUM2802 |
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Putative Escherichia coli TUM2802 RM systems
Ref: Komori,K. et al. unpublished
REBASE ref # 37603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,700 bp | CP135691 |
| plasmid pMTY2802_IncF: | 160,056 bp | CP135692 |
| plasmid pMTY2802_IncFII: | 72,904 bp | CP135693 |
REBASE acronym: Eco802
Org_num: 72057
All begin RS162_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16720 | endoribonuclease SymE | |||
| 16725 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco802ORF16735P |
| 16730 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco802ORF16735P |
| 16735 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco802ORF16735P |
| 16740 | restriction endonuclease | |||
| 18530 | ash family protein | |||
| 18535 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco802ORF18540P |
| 18540 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco802ORF18540P |
| 18545 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco802ORF18540P |
| 18550 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pMTY2802_IncF | ||||
| 25270 | IS1-like element IS1A family transposase | |||
| 25275 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco802ORF25285P |
| 25280 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S1.Eco802ORF25285P |
| 25285 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco802ORF25285P |
| 25290 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3470 | drug/metabolite exporter YedA | |||
| 3475 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco802DcmP |
| 3480 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco802DcmP |
| 3485 | phosphohydrolase | |||
| 10605 | DNA-binding transcriptional regulator Fis | |||
| 10610 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco802ORF10610P |
| 10615 | DUF2556 family protein | |||
| 11205 | ribulose-phosphate 3-epimerase | |||
| 11210 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco802DamP |
| 11215 | cell division protein DamX | |||
| 16365 | helix-turn-helix domain-containing protein | |||
| 16370 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco802ORF16370P |
| 16375 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco802ORF16370P |
| 16380 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco802ORF16370P |
| 16385 | McrC family protein | |||
| 22040 | 71 aa hypothetical protein | |||
| 22045 | M | M.KpnYN1ORFGP (89% identity) | M.Eco802ORF22045P | |
| 22050 | helix-turn-helix transcriptional regulator | |||
| plasmid pMTY2802_IncF | ||||
| 25210 | 73 aa hypothetical protein | |||
| 25215 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco802ORF25215P |
| 25220 | 103 aa hypothetical protein | |||
| plasmid pMTY2802_IncFII | ||||
| 25450 | 97 aa hypothetical protein | |||
| 25455 | M | M.Ssop356ORFAP (100% identity) | M.Eco802ORF25455P | |
| 25460 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16380 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16385 | R | EcosS9McrCP (100% identity) | Eco802McrCP | |
| 16390 | R | EcosS3McrBP (100% identity) | Eco802McrBP | |
| 16395 | glycosyltransferase family 2 protein | |||
| 16735 | class I SAM-dependent DNA methyltransferase | |||
| 16740 | R | Ecou021MrrP (100% identity) | Eco802MrrP | |
| 16745 | BrnT family toxin | |||