Escherichia coli Escherichia coli EC12011 |
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Putative Escherichia coli Escherichia coli EC12011 RM systems
Ref: Peirano,G. and Pitout,J. unpublished
REBASE ref # 37602
| Sequence length: | GenBank #: | |
| Chromosome: | 5,242,119 bp | CP135210 |
| plasmid pEC12011-1: | 167,222 bp | CP135211 |
REBASE acronym: Eco12011
Org_num: 72042
All begin RRI71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8175 | type IV toxin-antitoxin system AbiEi family | |||
| 8180 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco12011ORF8185P |
| 8185 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco12011ORF8185P |
| 8190 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco12011ORF8185P |
| 8195 | ash family protein | |||
| 10000 | restriction endonuclease | |||
| 10005 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco12011ORF10005P |
| 10010 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco12011ORF10005P |
| 10015 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco12011ORF10005P |
| 10020 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3810 | drug/metabolite exporter YedA | |||
| 3815 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco12011DcmP |
| 3820 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco12011DcmP |
| 3825 | phosphohydrolase | |||
| 10350 | McrC family protein | |||
| 10355 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco12011ORF10360P |
| 10360 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco12011ORF10360P |
| 10365 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco12011ORF10360P |
| 10370 | helix-turn-helix domain-containing protein | |||
| 11660 | response regulator receiver domain | |||
| 11665 | R | EcosS3ORF15775P (100% identity) | Eco12011ORF11670P | |
| 11670 | M | M.EcosS3ORF15775P (100% identity) | M.Eco12011ORF11670P | |
| 11675 | conjugal transfer protein TraG N-terminal | |||
| 15515 | cell division protein DamX | |||
| 15520 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12011DamP |
| 15525 | ribulose-phosphate 3-epimerase | |||
| 16705 | DUF2556 family protein | |||
| 16710 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco12011ORF16710P |
| 16715 | DNA-binding transcriptional regulator Fis | |||
| 20500 | PerC family transcriptional regulator | |||
| 20505 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco12011ORF20505P |
| 20510 | LexA family transcriptional regulator | |||
| 20545 | 67 aa hypothetical protein | |||
| 20550 | M | M.EcosR6ORF7985P (100% identity) | M.Eco12011ORF20550P | |
| 20555 | phage lysis protein EssD | |||
| 20680 | 257 aa hypothetical protein | |||
| 20685 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco12011ORF20685P |
| 20690 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco12011ORF20685P |
| 20695 | 121 aa hypothetical protein | |||
| 23550 | 71 aa hypothetical protein | |||
| 23555 | M | M.KpnYN1ORFGP (89% identity) | M.Eco12011ORF23555P | |
| 23560 | helix-turn-helix transcriptional regulator | |||
| 25820 | TrmB family transcriptional regulator | |||
| 25825 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco12011ORF25825P |
| 25840 | DUF3927 family protein | |||
| plasmid pEC12011-1 | ||||
| 26825 | 73 aa hypothetical protein | |||
| 26830 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco12011ORF26830P | |
| 26835 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9995 | BrnT family toxin | |||
| 10000 | R | Ecou021MrrP (100% identity) | Eco12011MrrP | |
| 10005 | class I SAM-dependent DNA methyltransferase | |||
| 10340 | glycosyltransferase family 2 protein | |||
| 10345 | R | EcosS3McrBP (100% identity) | Eco12011McrBP | |
| 10350 | R | EcosS9McrCP (100% identity) | Eco12011McrCP | |
| 10355 | Alw26I/Eco31I/Esp3I family type II restriction | |||