Pseudomonas aeruginosa Paer3125 |
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Putative Pseudomonas aeruginosa Paer3125 RM systems
Ref: Stoikov,I. et al. unpublished
REBASE ref # 37589
Complete sequence: 6,764,435 bp
GenBank #: CP135099
REBASE acronym: Pae3125
Org_num: 71988
All begin RPM50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18025 | endonuclease NucS | |||
| 18030 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae3125ORF18035P |
| 18035 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae3125ORF18035P |
| 18040 | HNH endonuclease signature motif containing | |||
| 18045 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae3125ORF18035P |
| 18050 | peptidase M15 | |||
| 20210 | site-specific integrase | |||
| 20215 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.Pae3125ORF20215P |
| 20220 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.Pae3125ORF20215P |
| 20225 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | Pae3125ORF20215P |
| 20230 | helix-turn-helix transcriptional regulator | |||
| 21685 | SprT family zinc-dependent metalloprotease | |||
| 21690 | R | Ssp0042ORF670P (76% identity) | Pae3125ORF21685P | |
| 21695 | IS21-like element ISPst3 family transposase | |||
| 21685 | SprT family zinc-dependent metalloprotease | |||
| 21690 | R | Ssp0042ORF670P (76% identity) | Pae3125ORF21690P | |
| 21695 | IS21-like element ISPst3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 55 | 70 aa hypothetical protein | |||
| 60 | M | M.PaeP13ORF19105P (100% identity) | M.Pae3125ORF60P | |
| 65 | IS3-like element IS222 family transposase | |||
| 11270 | 88 aa hypothetical protein | |||
| 11275 | M | M.PaeZU40ORF23255P (100% identity) | M.Pae3125ORF11275P | |
| 11280 | 86 aa hypothetical protein | |||
| 11470 | phosphohydrolase | |||
| 11475 | M | M.PaeZU40ORF23460P (99% identity) | M.Pae3125ORF11475P | |
| 11480 | 143 aa hypothetical protein | |||
| 13260 | nucleoid-associated protein YejK | |||
| 13265 | M | M.Paes32ORF1382P (100% identity) | M.Pae3125ORF13265P | |
| 13270 | Arc family DNA-binding protein | |||
| 18035 | class I SAM-dependent DNA methyltransferase | |||
| 18040 | R | PaePae36ORFBP (100% identity) | Pae3125ORF18040P | |
| 18045 | DEAD/DEAH box helicase family protein | |||
| 19745 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 19750 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae3125ORF19750P |
| 19755 | 83 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 440 | AIPR family protein | |||
| 445 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.Pae3125ORF445P |
| 450 | R | Paes32ORF4058P (100% identity) | CACACC | Pae3125ORF445P |
| 455 | IS3-like element ISPa32 family transposase | |||