Streptococcus suis 1652329 |
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Putative Streptococcus suis 1652329 RM systems
Ref: Kerdsin,A. et al. unpublished
REBASE ref # 37593
Complete sequence: 2,219,837 bp
GenBank #: CP135093
REBASE acronym: Ssu9
Org_num: 72004
All begin RMP64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4180 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4185 | R | SsuTANI1ORF578P (100% identity) | Ssu9ORF4190P | |
| 4190 | M | M.SsuTRG6ORF4410P (100% identity) | M.Ssu9ORF4190P | |
| 4195 | S | S1.Ssu5ORF6720P (100% identity) | S1.Ssu9ORF4190P | |
| 4200 | tyrosine-type DNA invertase PsrA | |||
| 4205 | S | S2.SsuTRG6ORF4410P (43% identity) | S2.Ssu9ORF4190P | |
| 4210 | S | S3.Ssu5ORF6720P (100% identity) | S3.Ssu9ORF4190P | |
| 4215 | ribose-5-phosphate isomerase RpiA | |||
| 8210 | AAA family ATPase | |||
| 8215 | S | S.Ssu4ORF9770P (100% identity) | S.Ssu9ORF8220P | |
| 8220 | M | M.SsuTRG6ORF8820P (100% identity) | M.Ssu9ORF8220P | |
| 8225 | R | SsuTRG6ORF8820P (100% identity) | Ssu9ORF8220P | |
| 8230 | FAD-containing oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu9ORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu9ORF255P |
| 265 | R | R1.SsuYB51ORFBP (100% identity) | GATC | R1.Ssu9ORF255P |
| 270 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu9ORF255P |
| 275 | phosphoribosylamine--glycine ligase | |||
| 4940 | 142 aa hypothetical protein | |||
| 4945 | M | M.SsuD9ORF1083P (100% identity) | M.Ssu9ORF4945P | |
| 4950 | replication initiator protein A | |||
| 5180 | 150 aa hypothetical protein | |||
| 5185 | M | M.SsuGX69ORF3500P (100% identity) | M1.Ssu9ORF5185P | |
| 5190 | M | M.SsuTRG6ORF5430P (100% identity) | M2.Ssu9ORF5185P | |
| 5195 | 74 aa hypothetical protein | |||
| 8875 | 142 aa hypothetical protein | |||
| 8880 | M | M.SsuD9ORF1083P (100% identity) | M.Ssu9ORF8880P | |
| 8885 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8265 | IS200/IS605 family transposase | |||
| 8270 | R | SsuTRG6ORF8875P (100% identity) | Ssu9ORF8275P | |
| 8275 | M | M.SsuT15ORF6640P (100% identity) | M.Ssu9ORF8275P | |
| 8280 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4555 | 262 aa hypothetical protein | |||
| 4560 | R | SsuTRG6McrBP (100% identity) | Ssu9McrBP | |
| 4565 | R | SsuTANI1McrCP (92% identity) | Ssu9McrCP | |
| 4570 | glutamine-hydrolyzing GMP synthase | |||