Streptococcus suis 1547095 |
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Putative Streptococcus suis 1547095 RM systems
Ref: Kerdsin,A. et al. unpublished
REBASE ref # 37593
Complete sequence: 2,174,946 bp
GenBank #: CP135094
REBASE acronym: Ssu5
Org_num: 72003
All begin RMP66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2435 | FAD-containing oxidoreductase | |||
| 2440 | R | SsuTRG6ORF8820P (100% identity) | Ssu5ORF2445P | |
| 2445 | M | M.SsuTRG6ORF8820P (100% identity) | M.Ssu5ORF2445P | |
| 2450 | S | S.SsuTRG6ORF8820P (100% identity) | S.Ssu5ORF2445P | |
| 2455 | AAA family ATPase | |||
| 8190 | serine--tRNA ligase | |||
| 8195 | M | M.SsuTANI1ORF1593P (100% identity) | M.Ssu5ORF8195P | |
| 8200 | S | S.SsuiS10ORFAP (39% identity) | S1.Ssu5ORF8195P | |
| 8205 | S | S2.SsuYB51ORFAP (100% identity) | S2.Ssu5ORF8195P | |
| 8210 | S | S3.Ssu34572ORF2755P (100% identity) | S3.Ssu5ORF8195P | |
| 8215 | R | SsuYB51ORFAP (100% identity) | Ssu5ORF8195P | |
| 8220 | S | S2.SsuWTORFDP (95% identity) | S4.Ssu5ORF8195P | |
| 8225 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu5ORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu5ORF255P |
| 265 | R | R1.SsuYB51ORFBP (79% identity) | GATC | R1.Ssu5ORF255P |
| 270 | DpnII family type II restriction endonuclease | |||
| 275 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu5ORF255P |
| 280 | phosphoribosylamine--glycine ligase | |||
| 3585 | 55 aa hypothetical protein | |||
| 3590 | M | M.SsuYZDH1ORF2310P (100% identity) | M1.Ssu5ORF3590P | |
| 3595 | 99 aa hypothetical protein | |||
| ??? | M | M1.SsuTRG6ORFAP (100% identity) | M2.Ssu5ORF3590P | |
| 3605 | 70 aa hypothetical protein | |||
| 5775 | 74 aa hypothetical protein | |||
| 5780 | M | M.SsuTRG6ORF5430P (100% identity) | M1.Ssu5ORF5780P | |
| 5785 | M | M.SsuGX69ORF3500P (100% identity) | M2.Ssu5ORF5780P | |
| 5790 | 150 aa hypothetical protein | |||
| 5905 | replication initiator protein A | |||
| 5910 | M | M.SsuTRG6ORF9505P (98% identity) | M.Ssu5ORF5910P | |
| 5915 | 142 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2385 | DUF3885 domain-containing protein | |||
| 2390 | M | M.Ssu2812ORF7575P (100% identity) | GCGATD | M.Ssu5ORF2390P |
| 2395 | R | SsuTRG6ORF8875P (100% identity) | GCGATD | Ssu5ORF2390P |
| 2400 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6340 | glutamine-hydrolyzing GMP synthase | |||
| 6345 | R | SsuTRG6McrCP (100% identity) | Ssu5McrCP | |
| 6350 | R | SsuTRG6McrBP (100% identity) | Ssu5McrBP | |
| 6355 | 262 aa hypothetical protein | |||