Streptomyces species Li-HN-5-11 |
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Putative Streptomyces species Li-HN-5-11 RM systems
Ref: Gao,J. unpublished
REBASE ref # 30047
Complete sequence: 9,427,803 bp
GenBank #: CP134875
REBASE acronym: Ssp511
Org_num: 72013
All begin RKE30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7425 | transposase | |||
| 7430 | R | SspW10ORFAP (94% identity) | Ssp511ORF7445P | |
| 7435 | S | S.Ssp1423ORF17215P (77% identity) | S.Ssp511ORF7445P | |
| 7440 | 266 aa hypothetical protein | |||
| 7445 | M | M.SspW10ORFAP (70% identity) | M.Ssp511ORF7445P | |
| 7450 | DUF1152 domain-containing protein | |||
| 38330 | 221 aa hypothetical protein | |||
| 38335 | M | M1.Ssp09ORF4390P (91% identity) | M1.Ssp511ORF38335P | |
| 38340 | M | M2.ScoWT48ORF15170P (97% identity) | M2.Ssp511ORF38335P | |
| 38345 | S | S.Sji8ORF5015P (50% identity) | S.Ssp511ORF38335P | |
| 38350 | R | ScoWT48ORF15170P (97% identity) | Ssp511ORF38335P | |
| 38355 | 438 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5730 | DNA-binding protein | |||
| 5735 | M | M.Ssp631ORF42115P (89% identity) | M.Ssp511ORF5735P | |
| 5740 | AAA family ATPase | |||
| 5785 | AAA family ATPase | |||
| 5790 | RM | SspZFG47ORF26950P (83% identity) | Ssp511ORF5790P | |
| 5795 | AAA family ATPase | |||
| 5835 | 170 aa hypothetical protein | |||
| 5840 | RM | Seu7ORF7815P (69% identity) | Ssp511ORF5840P | |
| 5845 | helicase-related protein | |||
| 10885 | 176 aa hypothetical protein | |||
| 10890 | RM | SspSSA4ORFFP (86% identity) | Ssp511ORF10890P | |
| 10895 | DUF397 domain-containing protein | |||
| 34540 | replication initiator protein RepSA | |||
| 34545 | M | M.SacORFDP (79% identity) | M.Ssp511ORF34545P | |
| 34550 | 56 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1705 | DEAD/DEAH box helicase family protein | |||
| 1710 | R | Sac8ORF20000P (73% identity) | Ssp511ORF1710P | |
| 1715 | HNH endonuclease | |||
| 1710 | AAA family ATPase | |||
| 1715 | R | Sac104ORFOP (50% identity) | Ssp511ORF1715P | |
| 1720 | DUF6507 family protein | |||
| 5740 | AAA family ATPase | |||
| 5745 | R | Sca370McrCP (91% identity) | Ssp511McrCP | |
| 5750 | R | Sgr86McrBP (93% identity) | Ssp511McrBP | |
| 5755 | 125 aa hypothetical protein | |||
| 5775 | DUF6247 family protein | |||
| 5780 | R | Sgr86McrC2P (92% identity) | Ssp511McrC2P | |
| 5785 | R | Sch1McrBP (84% identity) | Ssp511McrB2P | |
| 5790 | type ISP restriction/modification enzyme | |||