Pantoea agglomerans T88c |
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Putative Pantoea agglomerans T88c RM systems
Ref: Asselin,J.E. et al. unpublished
REBASE ref # 37557
| Sequence length: | GenBank #: | |
| Chromosome: | 4,201,259 bp | CP134719 |
| plasmid pT88c_C: | 163,071 bp | CP134722 |
REBASE acronym: PagT88c
Org_num: 71844
All begin RM157_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16830 | 247 aa hypothetical protein | |||
| 16835 | R | PagAR5ORF16755P (100% identity) | PagT88cORF16845P | |
| 16840 | S | S.PagAR5ORF16755P (100% identity) | S.PagT88cORF16845P | |
| 16845 | M | M2.PagAR5ORF16755P (100% identity) | M2.PagT88cORF16845P | |
| 16850 | M | M1.PagAR5ORF16755P (100% identity) | M1.PagT88cORF16845P | |
| 16855 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1955 | SPOR domain-containing protein | |||
| 1960 | M | M.PagTx10DamP (100% identity) | GATC | M.PagT88cDamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 11710 | 237 aa hypothetical protein | |||
| 11715 | R | Pan13I (70% identity) | PagT88cORF11715P | |
| 11720 | 223 aa hypothetical protein | |||
| plasmid pT88c_C | ||||
| 23435 | 76 aa hypothetical protein | |||
| 23440 | M | M.PagAR5ORF22705P (100% identity) | M.PagT88cORF23440P | |
| 23445 | 58 aa hypothetical protein | |||