Streptococcus suis MY1C3_3B |
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Putative Streptococcus suis MY1C3_3B RM systems
Ref: Murray,G.R. unpublished
REBASE ref # 37535
Complete sequence: 2,253,276 bp
GenBank #: CP134487
REBASE acronym: Ssu3B
Org_num: 71747
All begin RJW54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2630 | site-specific integrase | |||
| 2635 | S | S4.SsuDNR43ORF9145P (100% identity) | S4.Ssu3BORF2660P | |
| 2640 | R | SsuTANI1ORF1593P (100% identity) | Ssu3BORF2660P | |
| 2645 | S | S1.SsuTANI1ORF1593P (100% identity) | S3.Ssu3BORF2660P | |
| 2650 | S | S2.SsuMA8ORFDP (100% identity) | S2.Ssu3BORF2660P | |
| 2655 | S | S2.SsuTANI1ORF1593P (100% identity) | S1.Ssu3BORF2660P | |
| 2660 | M | M.SsuTANI1ORF1593P (100% identity) | M.Ssu3BORF2660P | |
| 2665 | serine--tRNA ligase | |||
| 4155 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4160 | R | SsuS11ORF4455P (100% identity) | Ssu3BORF4165P | |
| 4165 | M | M.SsuTRG6ORF4410P (100% identity) | M.Ssu3BORF4165P | |
| 4170 | S | S1.Ssu9ORF4190P (100% identity) | S1.Ssu3BORF4165P | |
| 4175 | tyrosine-type DNA invertase PsrA | |||
| 4180 | S | S2.SsuTRG6ORF4410P (43% identity) | S2.Ssu3BORF4165P | |
| 4185 | S | S3.Ssu9ORF4190P (100% identity) | S3.Ssu3BORF4165P | |
| 4190 | ribose-5-phosphate isomerase RpiA | |||
| 8295 | AAA family ATPase | |||
| 8300 | S | S.Ssu9ORF8220P (100% identity) | S.Ssu3BORF8305P | |
| 8305 | M | M.SsuTRG6ORF8820P (99% identity) | M.Ssu3BORF8305P | |
| 8310 | R | SsuTRG6ORF8820P (100% identity) | Ssu3BORF8305P | |
| 8315 | FAD-containing oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu3BORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu3BORF255P |
| 265 | R | R1.SsuYB51ORFBP (100% identity) | GATC | R1.Ssu3BORF255P |
| 270 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu3BORF255P |
| 275 | phosphoribosylamine--glycine ligase | |||
| 7125 | 70 aa hypothetical protein | |||
| ??? | M | M1.SsuTRG6ORFAP (100% identity) | M1.Ssu3BORFAP | |
| 7135 | 99 aa hypothetical protein | |||
| 7140 | M | M.SsuYZDH1ORF2310P (100% identity) | M2.Ssu3BORFAP | |
| 7145 | 59 aa hypothetical protein | |||
| 8985 | 142 aa hypothetical protein | |||
| 8990 | M | M.Ssu35541ORF4690P (100% identity) | M.Ssu3BORF8990P | |
| 8995 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8350 | IS200/IS605 family transposase | |||
| 8355 | R | SsuTRG6ORF8875P (100% identity) | Ssu3BORF8360P | |
| 8360 | M | M.SsuT15ORF6640P (100% identity) | M.Ssu3BORF8360P | |
| 8365 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4530 | 262 aa hypothetical protein | |||
| 4535 | R | SsuTRG6McrBP (100% identity) | Ssu3BMcrBP | |
| 4540 | R | SsuTRG6McrCP (100% identity) | Ssu3BMcrCP | |
| 4545 | glutamine-hydrolyzing GMP synthase | |||