Streptococcus suis TMW_SS028 |
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Putative Streptococcus suis TMW_SS028 RM systems
Ref: Murray,G.R. unpublished
REBASE ref # 37535
Complete sequence: 2,408,625 bp
GenBank #: CP134473
REBASE acronym: Ssu028
Org_num: 71751
All begin RJW55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1115 | serine hydrolase domain-containing protein | |||
| 1120 | M | M.SsuC2ORF1145P (100% identity) | M.Ssu028ORF1120P | |
| 1125 | S | S1.SsuC2ORF1145P (53% identity) | S1.Ssu028ORF1120P | |
| 1130 | S | S1.SsuC2ORF1145P (44% identity) | S2.Ssu028ORF1120P | |
| 1135 | 286 aa hypothetical protein | |||
| 1140 | 157 aa hypothetical protein | |||
| 1145 | S | S2.SsuC2ORF1145P (100% identity) | S3.Ssu028ORF1120P | |
| 1150 | R | SsuAKJ18ORF1640P (97% identity) | Ssu028ORF1120P | |
| 1155 | formate C-acetyltransferase | |||
| 2345 | site-specific integrase | |||
| 2350 | S | S4.SsuC2ORF2690P (100% identity) | S4.Ssu028ORF2375P | |
| 2355 | R | Ssu48ORF8385P (100% identity) | Ssu028ORF2375P | |
| 2360 | S | S2.SsuD9ORF1790P (72% identity) | S3.Ssu028ORF2375P | |
| 2365 | S | S2.SsuYZDH1ORF2625P (100% identity) | S2.Ssu028ORF2375P | |
| 2370 | S | S3.Ssu48ORF8385P (41% identity) | S1.Ssu028ORF2375P | |
| 2375 | M | M.SsuC2ORF2690P (100% identity) | M.Ssu028ORF2375P | |
| 2380 | serine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2160 | DUF1266 domain-containing protein | |||
| 2165 | M | M1.SsuYZDH1ORF2105P (100% identity) | M1.Ssu028ORF2165P | |
| 2170 | M | M2.SsuYZDH1ORF2105P (100% identity) | M2.Ssu028ORF2165P | |
| 2175 | R | SsuYZDH1ORF2105P (100% identity) | Ssu028ORF2165P | |
| 2180 | DNA methyltransferase | |||
| 5950 | zinc-ribbon domain-containing protein | |||
| 5955 | M | M1.SsuYZDH1ORF6410P (100% identity) | M1.Ssu028ORF5955P | |
| 5960 | 81 aa hypothetical protein | |||
| 5965 | M | M2.SsuYZDH1ORF6410P (100% identity) | M2.Ssu028ORF5955P | |
| 5970 | 279 aa hypothetical protein | |||
| 5975 | R | Ssu48ORF6340P (100% identity) | Ssu028ORF5955P | |
| 5980 | C | C.SsuS26ORF6265P (100% identity) | C.Ssu028ORF5955P | |
| 5985 | DUF5677 domain-containing protein | |||
| 8375 | DUF6161 domain-containing protein | |||
| 8380 | M | M.SsuYZDH1ORF8805P (100% identity) | M.Ssu028ORF8380P | |
| 8385 | R | Ssu48ORF2145P (100% identity) | Ssu028ORF8380P | |
| 8390 | DUF4368 domain-containing protein | |||
| 8625 | MmcQ/YjbR family DNA-binding protein | |||
| 8630 | R | Ssu48ORF1890P (99% identity) | Ssu028ORF8635P | |
| 8635 | M | M.SsuYZDH1ORF9065P (100% identity) | M.Ssu028ORF8635P | |
| 8640 | 264 aa hypothetical protein | |||
| 10190 | helix-turn-helix transcriptional regulator | |||
| 10195 | M | M.SsuYZDH1ORF10590P (100% identity) | M.Ssu028ORF10195P | |
| 10200 | 73 aa hypothetical protein | |||
| 10225 | 105 aa hypothetical protein | |||
| 10230 | M | M.SsuYZDH1ORF10625P (100% identity) | M.Ssu028ORF10230P | |
| 10235 | DNA cytosine methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3965 | DUF4391 domain-containing protein | |||
| 3970 | M | M.Ssu48ORF4090P (78% identity) | M.Ssu028ORF3970P | |
| 3975 | 305 aa hypothetical protein | |||
| 3980 | R | SsuYZDH1ORF4185P (99% identity) | Ssu028ORF3970P | |
| 3985 | 41 aa hypothetical protein | |||
| 4275 | 115 aa hypothetical protein | |||
| 4280 | M | M.Sor51445ORF7535P (92% identity) | M.Ssu028ORF4280P | |
| 4285 | R | Seq6176IP (92% identity) | Ssu028ORF4280P | |
| 4290 | SLATT domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6015 | glutamine-hydrolyzing GMP synthase | |||
| 6020 | R | SsuYZDH1McrCP (100% identity) | Ssu028McrCP | |
| 6025 | R | SsuYZDH1McrBP (100% identity) | Ssu028McrBP | |
| 6030 | 261 aa hypothetical protein | |||