Streptococcus suis NLS50 |
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Putative Streptococcus suis NLS50 RM systems
Ref: Murray,G.R. unpublished
REBASE ref # 37535
Complete sequence: 2,344,679 bp
GenBank #: CP134488
REBASE acronym: SsuNLS50
Org_num: 71749
All begin RJW53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3670 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 3675 | R | SsuDNS11ORF3470P (100% identity) | SsuNLS50ORF3680P | |
| 3680 | M | M.SsuWTORFAP (100% identity) | M.SsuNLS50ORF3680P | |
| 3685 | S | S1.SsuWTORFAP (100% identity) | S1.SsuNLS50ORF3680P | |
| 3690 | S | S2.SsuSs109ORF955P (100% identity) | S2.SsuNLS50ORF3680P | |
| 3695 | ribose-5-phosphate isomerase RpiA | |||
| 4870 | FAD-containing oxidoreductase | |||
| 4875 | R | SsuiS10ORFCP (70% identity) | CCAANNNNNNTTC | SsuNLS50ORF4890AP |
| 4880 | IS110 family transposase | |||
| 4885 | R | SsuSs109ORF1830BP (100% identity) | CCAANNNNNNTTC | SsuNLS50ORF4890BP |
| 4890 | M | M.SsuSs109ORF1830P (100% identity) | CCAANNNNNNTTC | M.SsuNLS50ORF4890P |
| 4895 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuNLS50ORF4890P |
| 4900 | 310 aa hypothetical protein | |||
| 9385 | serine--tRNA ligase | |||
| 9390 | M | M.SsuWTORFDP (100% identity) | M.SsuNLS50ORF9390P | |
| 9395 | S | S.SsuiS10ORFAP (50% identity) | S1.SsuNLS50ORF9390P | |
| 9400 | R | Ssu0088ORFCP (100% identity) | SsuNLS50ORF9390P | |
| 9405 | S | S2.SsuT15ORF9320P (95% identity) | S2.SsuNLS50ORF9390P | |
| 9410 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5185 | GTP pyrophosphokinase | |||
| 5190 | RM | SsuSs109ORF2140P (100% identity) | SsuNLS50ORF5190P | |
| 5195 | S | S.SsuSs109ORF2140P (100% identity) | S.SsuNLS50ORF5190P | |
| 5200 | 261 aa hypothetical protein | |||
| 6175 | 142 aa hypothetical protein | |||
| 6180 | M | M.SsuDNS11ORF5695P (100% identity) | M.SsuNLS50ORF6180P | |
| 6185 | replication initiator protein A | |||
| 8670 | Fic family protein | |||
| ??? | R | R1.SsuWTORFFP (38% identity) | SsuNLS50ORF8690P | |
| 8690 | M | M.SsuWTORFFP (98% identity) | M.SsuNLS50ORF8690P | |
| 8695 | valine--tRNA ligase | |||
| 10590 | 99 aa hypothetical protein | |||
| 10595 | M | M.SsuINT01ORF10575P (96% identity) | M.SsuNLS50ORF10595P | |
| 10600 | 52 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4755 | DUF3885 domain-containing protein | |||
| 4760 | M | M.SsuSs109ORF1705P (100% identity) | M.SsuNLS50ORF4760P | |
| 4765 | R | SsuSs109ORF1705P (100% identity) | SsuNLS50ORF4760P | |
| 4770 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5625 | 262 aa hypothetical protein | |||
| 5630 | R | SsuWTMcrBP (100% identity) | SsuNLS50McrBP | |
| 5635 | R | SsuSs46McrCP (100% identity) | SsuNLS50McrCP | |
| 5640 | glutamine-hydrolyzing GMP synthase | |||