Streptococcus suis 1522228 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus suis 1522228 RM systems
Ref: Murray,G.R. unpublished
REBASE ref # 37535
Complete sequence: 2,208,458 bp
GenBank #: CP134472
REBASE acronym: Ssu28
Org_num: 71744
All begin RJW56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3205 | FAD-containing oxidoreductase | |||
| 3210 | R | SsuTRG6ORF8820P (100% identity) | Ssu28ORF3215P | |
| 3215 | M | M.SsuTRG6ORF8820P (100% identity) | M.Ssu28ORF3215P | |
| 3220 | S | S.SsuTRG6ORF8820P (100% identity) | S.Ssu28ORF3215P | |
| 3225 | AAA family ATPase | |||
| 8890 | serine--tRNA ligase | |||
| 8895 | M | M.SsuTANI1ORF1593P (100% identity) | M.Ssu28ORF8895P | |
| 8900 | S | S2.SsuTANI1ORF1593P (100% identity) | S1.Ssu28ORF8895P | |
| 8905 | S | S2.SsuMA8ORFDP (100% identity) | S2.Ssu28ORF8895P | |
| 8910 | S | S1.SsuTANI1ORF1593P (100% identity) | S3.Ssu28ORF8895P | |
| 8915 | R | SsuTANI1ORF1593P (99% identity) | Ssu28ORF8895P | |
| 8920 | S | S4.SsuYAORF8415P (100% identity) | S4.Ssu28ORF8895P | |
| 8925 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu28ORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu28ORF255P |
| 265 | R | R1.SsuYB51ORFBP (100% identity) | GATC | R1.Ssu28ORF255P |
| 270 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu28ORF255P |
| 275 | phosphoribosylamine--glycine ligase | |||
| 6115 | 74 aa hypothetical protein | |||
| 6120 | M | M.SsuTRG6ORF5430P (100% identity) | M1.Ssu28ORF6120P | |
| 6125 | M | M.SsuGX69ORF3500P (100% identity) | M2.Ssu28ORF6120P | |
| 6130 | 150 aa hypothetical protein | |||
| 6370 | replication initiator protein A | |||
| 6375 | M | M.Ssu89ORF3143P (100% identity) | M.Ssu28ORF6375P | |
| 6380 | 142 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3155 | DUF3885 domain-containing protein | |||
| 3160 | M | M.SsuSs08ORF1750P (93% identity) | GCGATD | M.Ssu28ORF3160P |
| 3165 | R | SsuTRG6ORF8875P (100% identity) | GCGATD | Ssu28ORF3160P |
| 3170 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6815 | IS630 family transposase | |||
| 6820 | R | SsuTRG6McrCP (99% identity) | Ssu28McrCP | |
| 6825 | R | SsuTRG6McrBP (100% identity) | Ssu28McrBP | |
| 6830 | 262 aa hypothetical protein | |||