Shigella flexneri 2457T |
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Putative Shigella flexneri 2457T RM systems
Ref: Gabor,C. et al. unpublished
REBASE ref # 37527
| Sequence length: | GenBank #: | |
| Chromosome: | 4,643,553 bp | CP100044 |
| plasmid p2457T_165: | 165,691 bp | CP100046 |
REBASE acronym: Sfl2457T
Org_num: 71706
All begin NKG97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | endoribonuclease SymE | |||
| 1645 | S | S.SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | S.Sfl2457TORF1650P |
| 1650 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl2457TORF1650P |
| 1655 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl2457TORF1650P |
| 1660 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 290 | cell division protein DamX | |||
| 295 | M | M.SflTDamP (100% identity) | GATC | M.Sfl2457TDamP |
| 300 | ribulose-phosphate 3-epimerase | |||
| 12630 | drug/metabolite exporter YedA | |||
| 12635 | V | V.SflTDcmP (100% identity) | CCWGG | V.Sfl2457TDcmP |
| 12640 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl2457TDcmP |
| 12645 | HD domain-containing protein | |||
| 19480 | DNA-binding transcriptional regulator Fis | |||
| 19485 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl2457TORF19485P |
| 19490 | DUF2556 family protein | |||
| plasmid p2457T_165 | ||||
| 24920 | DNA-binding protein | |||
| 24925 | M | M.Ype21801ORF197P (100% identity) | M.Sfl2457TORF24925P | |
| 24930 | 273 aa hypothetical protein | |||
| 25330 | 56 aa hypothetical protein | |||
| 25335 | M | M.StyCORF187P (100% identity) | CCWGG | M.Sfl2457TORF25335P |
| 25340 | thermonuclease family protein | |||