Shigella flexneri CCH060 |
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Putative Shigella flexneri CCH060 RM systems
Ref: Gabor,C. et al. unpublished
REBASE ref # 37527
Complete sequence: 4,684,226 bp
GenBank #: CP099865
REBASE acronym: Sfl60
Org_num: 71707
All begin NIU13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5705 | IS3-like element IS600 family transposase | |||
| 5710 | R | Sfl714ORF7650P (100% identity) | GGANNNNNNCTTT | Sfl60ORF5715P |
| 5715 | M | M.Sfl714ORF7650P (100% identity) | GGANNNNNNCTTT | M.Sfl60ORF5715P |
| 5720 | S | S.Sbo12985I (100% identity) | GGANNNNNNCTTT | S.Sfl60ORF5715P |
| 5725 | 260 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 925 | replication endonuclease | |||
| 930 | M | M.Sfl714ORF12335P (100% identity) | GATC | M.Sfl60ORF930P |
| 935 | IS3 family transposase | |||
| 5665 | HNH endonuclease | |||
| 5670 | R | Sfl714ORF7695P (100% identity) | Sfl60ORF5670P | |
| 5675 | peptidase | |||
| 10680 | cell division protein DamX | |||
| 10685 | M | M.UbaC1152DamP (100% identity) | GATC | M.Sfl60DamP |
| 10690 | ribulose-phosphate 3-epimerase | |||
| 11280 | DUF2556 family protein | |||
| 11285 | M | M.Sfl714ORF2095P (100% identity) | ATGCAT | M.Sfl60ORF11285P |
| 11290 | DNA-binding transcriptional regulator Fis | |||
| 18865 | 79 aa hypothetical protein | |||
| 18870 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Sfl60ORF18870P |
| 18890 | 39 aa hypothetical protein | |||
| 23165 | drug/metabolite exporter YedA | |||
| 23170 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Sfl60DcmP |
| 23175 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sfl60DcmP |
| 23180 | phosphohydrolase | |||