Escherichia coli TUM12357 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TUM12357 RM systems
Ref: Aoki,K. unpublished
REBASE ref # 37508
| Sequence length: | GenBank #: | |
| Chromosome: | 5,026,236 bp | CP134370 |
| plasmid pMTY12357_IncI1-I: | 90,769 bp | CP134372 |
REBASE acronym: Eco357
Org_num: 71631
All begin RJ642_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4680 | IS66 family transposase | |||
| 4685 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | Eco357ORF4690P |
| 4690 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.Eco357ORF4690P |
| 4695 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Eco357ORF4690P |
| 4700 | transposase domain-containing protein | |||
| 21190 | restriction endonuclease | |||
| 21195 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.Eco357ORF21195P |
| 21200 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco357ORF21195P |
| 21205 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | Eco357ORF21195P |
| 21210 | endoribonuclease SymE | |||
| 22435 | AAA family ATPase | |||
| 22440 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco357ORF22445P |
| 22445 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco357ORF22445P |
| 22450 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco357ORF22445P |
| 22455 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco357DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 10125 | phosphohydrolase | |||
| 10130 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco357DcmP |
| 10135 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco357DcmP |
| 10140 | drug/metabolite exporter YedA | |||
| 16090 | replication endonuclease | |||
| 16095 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco357ORF16095P |
| 16100 | TraR/DksA family transcriptional regulator | |||
| 20960 | LexA family transcriptional regulator | |||
| 20965 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco357ORF20965P |
| 20970 | PerC family transcriptional regulator | |||
| plasmid pMTY12357_IncI1-I | ||||
| 25815 | 70 aa hypothetical protein | |||
| 25820 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco357ORF25820P |
| 25825 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21185 | BrnT family toxin | |||
| 21190 | R | SflSTLE3MrrP (100% identity) | Eco357MrrP | |
| 21195 | class I SAM-dependent DNA methyltransferase | |||