Salmonella enterica subsp. enterica serovar Alachua FSIS22029592 |
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Putative Salmonella enterica subsp. enterica serovar Alachua FSIS22029592 RM systems
Ref: Li,C. unpublished
REBASE ref # 30774
| Sequence length: | GenBank #: | |
| Chromosome: | 4,918,418 bp | CP100654 |
| plasmid pFSIS22029592-1: | 318,597 bp | CP100655 |
REBASE acronym: Sen592
Org_num: 71702
All begin IT836_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2680 | IS5-like element ISKpn26 family transposase | |||
| 2685 | M | M.Sen24355ORF21135AP (92% identity) | M.Sen592ORF2685P | |
| 2690 | DUF262 domain-containing protein | |||
| 3615 | toll/interleukin-1 receptor domain-containing | |||
| 3620 | M | M1.Sen8261II (100% identity) | M1.Sen592ORF3620P | |
| 3625 | M | M2.Sen60561ORF23535P (99% identity) | M2.Sen592ORF3620P | |
| 3630 | S | S2.Sen8261II (69% identity) | S.Sen592ORF3620P | |
| 3635 | R | Sen60561ORF23535P (99% identity) | Sen592ORF3620P | |
| 3640 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3650 | fosfomycin resistance glutathione transferase | |||
| 3655 | R | Sen8261ORF6386P (100% identity) | Sen592ORF3655P | |
| 3660 | YebC/PmpR family DNA-binding transcriptional | |||
| 6020 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 6025 | M | M.Sen8261ORF5670P (100% identity) | M.Sen592ORF6025P | |
| 6030 | IS3 family transposase | |||
| 10095 | PerC family transcriptional regulator | |||
| 10100 | M | M.SenSW70ORF13275P (99% identity) | M.Sen592ORF10100P | |
| 10105 | DNA cytosine methyltransferase | |||
| 10100 | phage N-6-adenine-methyltransferase | |||
| 10105 | M | M2.Sen59887ORF13890P (99% identity) | M.Sen592ORF10105P | |
| 10110 | LexA family transcriptional regulator | |||
| 14775 | drug/metabolite exporter YedA | |||
| 14780 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen592DcmP |
| 14785 | M | M.Sens29855DcmP (100% identity) | CCWGG | M.Sen592DcmP |
| 14790 | phosphohydrolase | |||
| 21535 | DNA-binding transcriptional regulator Fis | |||
| 21540 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen592ORF21540P |
| 21545 | DUF2556 family protein | |||
| 22025 | ribulose-phosphate 3-epimerase | |||
| 22030 | M | M.StyTDamP (100% identity) | GATC | M.Sen592DamP |
| 22035 | cell division protein DamX | |||
| plasmid pFSIS22029592-1 | ||||
| 24610 | 101 aa hypothetical protein | |||
| 24615 | M | M.Sso866ORF27155P (100% identity) | M.Sen592ORF24615P | |
| 24620 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6140 | MFS transporter | |||
| 6145 | M | M.Sens679ORF16435P (99% identity) | CAGAG | M.Sen592ORF6145P |
| 6150 | R | Sen8261IP (99% identity) | CAGAG | Sen592ORF6145P |
| 6155 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3600 | AAA domain-containing protein | |||
| 3605 | R | SenTY27MrrP (100% identity) | Sen592MrrP | |
| 3610 | 102 aa hypothetical protein | |||