Citrobacter freundii CF2 |
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Putative Citrobacter freundii CF2 RM systems
Ref: Turton,J.F. and Turton,J.A. unpublished
REBASE ref # 27272
| Sequence length: | GenBank #: | |
| Chromosome: | 5,100,453 bp | CP133852 |
| plasmid unnamed2: | 302,783 bp | CP133848 |
REBASE acronym: CfrCF2
Org_num: 71583
All begin RHA96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21635 | restriction endonuclease | |||
| 21640 | R | CspCF971ORF7160P (100% identity) | CfrCF2ORF21645P | |
| 21645 | M | M.CspCF971ORF7160P (100% identity) | M.CfrCF2ORF21645P | |
| 21650 | S | S.CspCF971ORF7160P (100% identity) | S.CfrCF2ORF21645P | |
| 21655 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.CspMGH103ORFEP (100% identity) | ATGCAT | M.CfrCF2ORF2420P |
| 2425 | integrase arm-type DNA-binding domain-containing | |||
| 8855 | recombinase family protein | |||
| 8860 | R | CspC108ORFHP (100% identity) | CfrCF2ORF8860P | |
| 8865 | HNH endonuclease | |||
| 9710 | phosphohydrolase | |||
| 9715 | M | M.CspCF971ORF17880P (100% identity) | CCWGG | M.CfrCF2ORF9715P |
| 9720 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.CfrCF2ORF9715P |
| 9725 | drug/metabolite exporter YedA | |||
| 10255 | conserved phage C-terminal domain-containing | |||
| 10260 | M | M.Cfr13639ORF1447P (98% identity) | M1.CfrCF2ORF10260P | |
| 10265 | M | M.CfrB38ORF1059P (99% identity) | M2.CfrCF2ORF10260P | |
| 10270 | RusA family crossover junction | |||
| 16880 | replication endonuclease | |||
| 16885 | M | M.Cfrz4ORF3170P (94% identity) | M.CfrCF2ORF16885P | |
| 16890 | DUF3850 domain-containing protein | |||
| 21810 | HNH endonuclease | |||
| 21815 | R | CfrUKJ86ORF5020P (98% identity) | CfrCF2ORF21815P | |
| 21820 | DNA methyltransferase | |||
| 21815 | HNH endonuclease | |||
| 21820 | M | M.Cse089ORF16985P (99% identity) | M.CfrCF2ORF21820P | |
| 21825 | AAA family ATPase | |||
| 26665 | cell division protein DamX | |||
| 26670 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrCF2DamP |
| 26675 | ribulose-phosphate 3-epimerase | |||
| plasmid unnamed2 | ||||
| 1560 | DNA polymerase III subunit beta | |||
| 1565 | M | M.Sen3039ORF24445P (21% identity) | M.CfrCF2ORF1565AP | |
| 1570 | IS66 family insertion sequence element accessory | |||
| 1575 | IS66 family transposase | |||
| 1580 | M | M.Sen3039ORF24445P (76% identity) | M.CfrCF2ORF1565BP | |
| 1585 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 1645 | inovirus Gp2 family protein | |||
| 1650 | R | Kqu2018ORF4320P (100% identity) | CfrCF2ORF1650P | |
| 1655 | site-specific DNA-methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21630 | GTPase | |||
| 21635 | R | CbrE4C06MrrP (100% identity) | CfrCF2MrrP | |
| 21640 | DEAD/DEAH box helicase family protein | |||