Salmonella enterica subsp. enterica serovar Kedougou SA613 |
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Putative Salmonella enterica subsp. enterica serovar Kedougou SA613 RM systems
Ref: Wetchasirigul,S. unpublished
REBASE ref # 37480
| Sequence length: | GenBank #: | |
| Chromosome: | 4,963,846 bp | CP133422 |
| plasmid unnamed2: | 101,760 bp | CP133423 |
REBASE acronym: SenSA613
Org_num: 71519
All begin RC084_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20630 | restriction endonuclease | |||
| 20635 | R | SenW714ORF20250P (100% identity) | GAGNNNNNNRTAYG | SenSA613ORF20640P |
| 20640 | M | M.SenW714ORF20250P (100% identity) | GAGNNNNNNRTAYG | M.SenSA613ORF20640P |
| 20645 | S | S.SenW714ORF20250P (100% identity) | GAGNNNNNNRTAYG | S.SenSA613ORF20640P |
| 20650 | endoribonuclease SymE | |||
| 20910 | HNH endonuclease signature motif containing | |||
| 20915 | M | M.SenW714ORF20525P (100% identity) | M.SenSA613ORF20915P | |
| 20920 | S | S.SenW714ORF20525P (100% identity) | S.SenSA613ORF20915P | |
| 20925 | R | SenW714ORF20525P (100% identity) | SenSA613ORF20915P | |
| 20930 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2520 | DUF2556 family protein | |||
| 2525 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSA613ORF2525P |
| 2530 | DNA-binding transcriptional regulator Fis | |||
| 9690 | phosphohydrolase | |||
| 9695 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSA613DcmP |
| 9700 | V | V.SenW714DcmP (100% identity) | V.SenSA613DcmP | |
| 9705 | drug/metabolite exporter YedA | |||
| 20345 | phage lysis protein EssD | |||
| 20350 | M | M.SenW714ORF19970P (100% identity) | M.SenSA613ORF20350P | |
| 20355 | 67 aa hypothetical protein | |||
| 20385 | LexA family transcriptional regulator | |||
| 20390 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenSA613ORF20390P |
| 20395 | PerC family transcriptional regulator | |||
| 20770 | YebC/PmpR family DNA-binding transcriptional | |||
| 20775 | R | SenW714ORF20385P (100% identity) | SenSA613ORF20775P | |
| 20780 | 64 aa hypothetical protein | |||
| 20940 | integrase | |||
| 20945 | R | SenW714ORF20555P (100% identity) | GAAC | SenSA613ORF20945P |
| 20950 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed2 | ||||
| 24650 | 73 aa hypothetical protein | |||
| 24655 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.SenSA613ORF24655P |
| 24660 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18065 | small effector SsaA | |||
| 18070 | R | SenW714ORF17715P (100% identity) | CAGAG | SenSA613ORF18075P |
| 18075 | M | M.SenW714ORF17715P (100% identity) | CAGAG | M.SenSA613ORF18075P |
| 18080 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20625 | BrnT family toxin | |||
| 20630 | R | SenW714MrrP (100% identity) | SenSA613MrrP | |
| 20635 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5825 | 3-5 exonuclease | |||
| 5830 | M | M.SenW714ORF5945P (100% identity) | GATC | M.SenSA613ORF5830P |
| 5835 | replication endonuclease | |||