Escherichia fergusonii 22C057LT |
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Putative Escherichia fergusonii 22C057LT RM systems
Ref: Kakita,T. et al. unpublished
REBASE ref # 37455
| Sequence length: | GenBank #: | |
| Chromosome: | 4,531,332 bp | AP028852 |
| plasmid p22C057LT1: | 200,586 bp | AP028853 |
| plasmid p22C057LT3: | 120,834 bp | AP028855 |
| plasmid p22C057LT4: | 95,480 bp | AP028856 |
REBASE acronym: Efe57LT
Org_num: 71421
All begin Ef22C057LT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32640 | 48 aa hypothetical protein | |||
| 32650 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Efe57LTORF32660P |
| 32660 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.Efe57LTORF32660P |
| 32670 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | Efe57LTORF32660P |
| 32680 | 74 aa hypothetical protein | |||
| 34860 | 119 aa hypothetical protein | |||
| 34870 | R | Efe9LTORF34980P (100% identity) | Efe57LTORF34880P | |
| 34880 | M | M.SflTORF4636P (98% identity) | M.Efe57LTORF34880P | |
| 34890 | S | S.Efe9LTORF34980P (100% identity) | S.Efe57LTORF34880P | |
| 34900 | endoribonuclease SymE | |||
| plasmid p22C057LT3 | ||||
| 45640 | 168 aa hypothetical protein | |||
| 45650 | R | Efe9LTORF43980P (100% identity) | GAGNNNNNRTGA | Efe57LTORF45670P |
| 45660 | S | S.Efe9LTORF43980P (100% identity) | GAGNNNNNRTGA | S.Efe57LTORF45670P |
| 45670 | M | M.Efe7LTORF43470P (100% identity) | GAGNNNNNRTGA | M.Efe57LTORF45670P |
| 45680 | 75 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2240 | bifunctional isocitrate dehydrogenase | |||
| 2250 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe57LTORF2250P |
| 2260 | glyoxylate bypass operon transcriptional | |||
| 5550 | helix-turn-helix domain-containing protein | |||
| 5560 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Efe57LTORF5560P |
| 5570 | RusA family crossover junction | |||
| 25270 | DNA-binding protein | |||
| 25280 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Efe57LTORF25280P |
| 25290 | 200 aa hypothetical protein | |||
| 35040 | anti-phage ZorAB system protein ZorA | |||
| 35050 | M | M.Efe9LTDndBP (100% identity) | M.Efe57LTDndBP | |
| 35060 | DNA phosphorothioation system sulfurtransferase | |||
| 35050 | DNA sulfur modification protein DndB | |||
| 35060 | M | M.Efe9LTDndCP (100% identity) | M.Efe57LTDndCP | |
| 35070 | DNA sulfur modification protein DndD | |||
| 35060 | DNA phosphorothioation system sulfurtransferase | |||
| 35070 | M | M.Efe9LTDndDP (100% identity) | M.Efe57LTDndDP | |
| 35080 | 117 aa hypothetical protein | |||
| 35070 | DNA sulfur modification protein DndD | |||
| 35080 | M | M.Efe9LTDndEP (100% identity) | M.Efe57LTDndEP | |
| 35090 | DGQHR domain-containing protein | |||
| 35100 | 174 aa hypothetical protein | |||
| 35110 | R | Efe9LTDptHP (100% identity) | Efe57LTDptHP | |
| 35120 | 440 aa hypothetical protein | |||
| 35110 | 1695 aa hypothetical protein | |||
| 35120 | R | Efe9LTDptGP (100% identity) | Efe57LTDptGP | |
| 35130 | 549 aa hypothetical protein | |||
| 35120 | 440 aa hypothetical protein | |||
| 35130 | R | Efe9LTDptFP (100% identity) | Efe57LTDptFP | |
| 35140 | integrase arm-type DNA-binding domain-containing | |||
| 36400 | DNA-binding transcriptional regulator Fis | |||
| 36410 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe57LTORF36410P |
| 36420 | DUF2556 family protein | |||
| 37390 | ribulose-phosphate 3-epimerase | |||
| 37400 | M | M.EfeEF04DamP (100% identity) | GATC | M.Efe57LTDamP |
| 37410 | cell division protein DamX | |||
| plasmid p22C057LT1 | ||||
| 42540 | 55 aa hypothetical protein | |||
| 42550 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Efe57LTORF42550P |
| 42560 | thermonuclease family protein | |||
| 43260 | 108 aa hypothetical protein | |||
| 43270 | M | M.YpsF1ORFBP (100% identity) | M.Efe57LTORF43270P | |
| 43280 | 202 aa hypothetical protein | |||
| plasmid p22C057LT3 | ||||
| 46090 | 63 aa hypothetical protein | |||
| 46100 | M | M.Efe9LTORF44210P (100% identity) | M.Efe57LTORF46100P | |
| 46110 | recombination-associated protein RdgC | |||
| plasmid p22C057LT4 | ||||
| 46570 | DUF1281 domain-containing protein | |||
| 46580 | M | M.SspPIBORF23080P (100% identity) | M.Efe57LTORF46580P | |
| 46590 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34900 | endoribonuclease SymE | |||
| 34910 | R | Efe9LTGmrSDP (100% identity) | Efe57LTGmrSDP | |
| 34920 | DUF1127 domain-containing protein | |||
| 34960 | DUF445 domain-containing protein | |||
| 34980 | R | Efe9LTMrrP (100% identity) | Efe57LTMrrP | |
| 34990 | IS3 family transposase | |||