Salmonella enterica subsp. enterica 1-E6 |
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Putative Salmonella enterica subsp. enterica 1-E6 RM systems
Ref: Huang,T.-W. unpublished
REBASE ref # 37477
Complete sequence: 5,280,279 bp
GenBank #: CP065066
REBASE acronym: Sen1E6
Org_num: 71487
All begin I0P19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20210 | restriction endonuclease | |||
| 20215 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1E6ORF20220P |
| 20220 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1E6ORF20220P |
| 20225 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1E6ORF20220P |
| 20230 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen1E6DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1E6ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 family protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen1E6ORF3235P |
| 3240 | replication endonuclease | |||
| 5610 | IS6-like element IS26 family transposase | |||
| 5615 | M | M.StyCORF187P (49% identity) | M.Sen1E6ORF5615P | |
| 5620 | thermonuclease family protein | |||
| 6240 | ead/Ea22-like family protein | |||
| 6245 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen1E6ORF6245P |
| 6250 | 92 aa hypothetical protein | |||
| 9560 | PerC family transcriptional regulator | |||
| 9565 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen1E6ORF9565P |
| 9570 | RusA family crossover junction | |||
| 9810 | phosphohydrolase | |||
| 9815 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1E6DcmP |
| 9820 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen1E6DcmP |
| 9825 | drug/metabolite exporter YedA | |||
| 20370 | BREX system P-loop protein BrxC | |||
| 20375 | RM | StyUK1IV (100% identity) | GATCAG | Sen1E6ORF20375P |
| 20380 | AAA family ATPase | |||
| 21935 | 284 aa hypothetical protein | |||
| 21940 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen1E6ORF21940P |
| 21945 | DNA-binding protein | |||
| 22065 | 202 aa hypothetical protein | |||
| 22070 | M | M.Ssp15303ORFDP (100% identity) | M.Sen1E6ORF22070P | |
| 22075 | 106 aa hypothetical protein | |||
| 22785 | thermonuclease family protein | |||
| 22790 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen1E6ORF22790P |
| 22795 | 55 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17900 | 33 aa hypothetical protein | |||
| 17905 | R | StyUK1IP (99% identity) | CAGAG | Sen1E6ORF17910P |
| 17910 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1E6ORF17910P |
| 17915 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20205 | BrnT family toxin | |||
| 20210 | R | StyUK1MrrP (99% identity) | Sen1E6MrrP | |
| 20215 | type I restriction-modification system | |||
| 20395 | protease Lon-related BREX system protein BrxL | |||
| 20400 | R | StyLTMrrP (100% identity) | Sen1E6Mrr2P | |
| 20405 | ATP-binding protein | |||