Salmonella enterica subsp. enterica RG21060838 |
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Putative Salmonella enterica subsp. enterica RG21060838 RM systems
Ref: Huang,T.-W. unpublished
REBASE ref # 37477
Complete sequence: 4,974,396 bp
GenBank #: CP065062
REBASE acronym: Sen38
Org_num: 71495
All begin I0P42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8750 | restriction endonuclease | |||
| 8755 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen38ORF8760P |
| 8760 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen38ORF8760P |
| 8765 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen38ORF8760P |
| 8770 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8915 | BREX system P-loop protein BrxC | |||
| 8920 | RM | StyUK1IV (100% identity) | GATCAG | Sen38ORF8920P |
| 8925 | AAA family ATPase | |||
| 10350 | phage holin, lambda family | |||
| 10355 | M | M.EcoRL465ORFGP (100% identity) | M.Sen38ORF10355P | |
| 10360 | 67 aa hypothetical protein | |||
| 10385 | LexA family transcriptional regulator | |||
| 10390 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Sen38ORF10390P |
| 10395 | PerC family transcriptional regulator | |||
| 11525 | thermonuclease family protein | |||
| 11530 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen38ORF11530P |
| 11535 | 55 aa hypothetical protein | |||
| 14860 | cell division protein DamX | |||
| 14865 | M | M.StyTDamP (100% identity) | GATC | M.Sen38DamP |
| 14870 | ribulose-phosphate 3-epimerase | |||
| 15355 | DUF2556 family protein | |||
| 15360 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen38ORF15360P |
| 15365 | DNA-binding transcriptional regulator Fis | |||
| 18820 | TraR/DksA family transcriptional regulator | |||
| 18825 | M | M.Ssp15303ORFCP (88% identity) | M.Sen38ORF18825P | |
| 18830 | replication endonuclease | |||
| 22365 | phosphohydrolase | |||
| 22370 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen38DcmP |
| 22375 | V | V.Ssp15303Dcm2P (100% identity) | V.Sen38DcmP | |
| 22380 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6260 | 33 aa hypothetical protein | |||
| 6265 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen38ORF6270P |
| 6270 | M | M.Ssp15303ORFGP (100% identity) | CAGAG | M.Sen38ORF6270P |
| 6275 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8745 | BrnT family toxin | |||
| 8750 | R | StyUK1MrrP (100% identity) | Sen38MrrP | |
| 8755 | type I restriction-modification system | |||
| 8940 | protease Lon-related BREX system protein BrxL | |||
| 8945 | R | StyLTMrrP (100% identity) | Sen38Mrr2P | |
| 8950 | ATP-binding protein | |||