Salmonella enterica subsp. enterica 178 |
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Putative Salmonella enterica subsp. enterica 178 RM systems
Ref: Huang,T.-W. unpublished
REBASE ref # 37477
| Sequence length: | GenBank #: | |
| Chromosome: | 4,994,885 bp | CP065131 |
| plasmid p178-CMY-149k: | 148,549 bp | CP065132 |
REBASE acronym: Sen78
Org_num: 71492
All begin I0P23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20550 | restriction endonuclease | |||
| 20555 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen78ORF20560P |
| 20560 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen78ORF20560P |
| 20565 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen78ORF20560P |
| 20570 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen78DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen78ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6080 | PerC family transcriptional regulator | |||
| 6085 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen78ORF6085P |
| 6090 | RusA family crossover junction | |||
| 9395 | PerC family transcriptional regulator | |||
| 9400 | M | M.StyUK1V (100% identity) | GATC | M.Sen78ORF9400P |
| 9405 | RusA family crossover junction | |||
| 9640 | phosphohydrolase | |||
| 9645 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen78DcmP |
| 9650 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen78DcmP |
| 9655 | drug/metabolite exporter YedA | |||
| 20710 | BREX system P-loop protein BrxC | |||
| 20715 | RM | StyUK1IV (100% identity) | GATCAG | Sen78ORF20715P |
| 20720 | AAA family ATPase | |||
| plasmid p178-CMY-149k | ||||
| 24675 | 103 aa hypothetical protein | |||
| 24680 | M | M.StyR64ORFAP (100% identity) | M.Sen78ORF24680P | |
| 24685 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18040 | 33 aa hypothetical protein | |||
| 18045 | R | StyUK1IP (99% identity) | CAGAG | Sen78ORF18050P |
| 18050 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen78ORF18050P |
| 18055 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20545 | BrnT family toxin | |||
| 20550 | R | StyUK1MrrP (100% identity) | Sen78MrrP | |
| 20555 | type I restriction-modification system | |||
| 20735 | protease Lon-related BREX system protein BrxL | |||
| 20740 | R | StyLTMrrP (100% identity) | Sen78Mrr2P | |
| 20745 | ATP-binding protein | |||