Salmonella enterica subsp. enterica 171 |
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Putative Salmonella enterica subsp. enterica 171 RM systems
Ref: Huang,T.-W. unpublished
REBASE ref # 37477
| Sequence length: | GenBank #: | |
| Chromosome: | 4,686,363 bp | CP065121 |
| plasmid p171-47k: | 47,133 bp | CP065124 |
REBASE acronym: Sen171
Org_num: 71489
All begin I0P37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19370 | NERD domain-containing protein | |||
| 19375 | S | S1.SenSA617ORF19495P (100% identity) | S1.Sen171ORF19380P | |
| 19380 | M | M2.SenSA617ORF19495P (100% identity) | M2.Sen171ORF19380P | |
| 19385 | restriction endonuclease | |||
| 19390 | M | M.StySBLI (100% identity) | M1.Sen171ORF19380P | |
| 19395 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S2.Sen171ORF19380P |
| 19400 | R | SenSA608ORF19700P (100% identity) | Sen171ORF19380P | |
| 19405 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen171DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen171ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8890 | PerC family transcriptional regulator | |||
| 8895 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen171ORF8895P |
| 8900 | RusA family crossover junction | |||
| 13745 | drug/metabolite exporter YedA | |||
| 13750 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen171DcmP |
| 13755 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen171DcmP |
| 13760 | phosphohydrolase | |||
| 19515 | YebC/PmpR family DNA-binding transcriptional | |||
| 19520 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen171ORF19520P |
| 19525 | IS3 family transposase | |||
| plasmid p171-47k | ||||
| 23640 | EAL domain-containing protein | |||
| 23645 | R | YpsR1ORFAP (100% identity) | CCWGG | Sen171ORF23650P |
| 23650 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Sen171ORF23650P |
| 23655 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17275 | 33 aa hypothetical protein | |||
| 17280 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen171ORF17285P |
| 17285 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen171ORF17285P |
| 17290 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19380 | N-6 DNA methylase | |||
| 19385 | R | SenSA617MrrP (100% identity) | Sen171MrrP | |
| 19390 | type I restriction-modification system subunit | |||