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Putative Fusobacterium nucleatum S-V3 RM systems
Ref: Shimomura,Y. et al. unpublished
REBASE ref # 37456
Complete sequence: 2,140,279 bp
GenBank #: AP028642
REBASE acronym: FnuSV3
Org_num: 71433
All begin FNSV3_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
14680 | MATE family efflux transporter | |||
14690 | R | FnuCV3ORF2500P (100% identity) | FnuSV3ORF14730P | |
??? | S | S2.Fnu037IIIP (100% identity) | S2.FnuSV3ORF14730P | |
14710 | S | S1.Fnu037III (98% identity) | YAGNNNNNNNTAYG | S1.FnuSV3ORF14730P |
14720 | virulence RhuM family protein | |||
14730 | M | M.FnuCV3ORF2500P (100% identity) | M.FnuSV3ORF14730P | |
14740 | cyclically-permuted mutarotase family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
7390 | 259 aa hypothetical protein | |||
7400 | RM | FnuCV3ORF9820P (100% identity) | CTTAATT | FnuSV3ORF7400P |
7410 | KAP family P-loop domain protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4040 | DUF4391 domain-containing protein | |||
??? | M | M2.FnuCV3ORF13110P (100% identity) | M1.FnuSV3ORF4050P | |
4080 | Abi family protein | |||
??? | M | M1.FnuCV3ORF13110P (100% identity) | M2.FnuSV3ORF4050P | |
4120 | R | FnuSB054ORF3665P (100% identity) | FnuSV3ORF4050P | |
4130 | bifunctional pyr operon transcriptional | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
16700 | RidA family protein | |||
16710 | R | FnuCV3ORF520P (100% identity) | FnuSV3ORF16710P | |
16720 | 54 aa hypothetical protein |