Pseudomonas aeruginosa pae001 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa pae001 RM systems
Ref: Li,D. et al. unpublished
REBASE ref # 37420
| Sequence length: | GenBank #: | |
| Chromosome: | 7,051,179 bp | CP133094 |
| plasmid ppae01: | 448,610 bp | CP133095 |
REBASE acronym: Pae01
Org_num: 71313
All begin RBI07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12285 | peptidase M15 | |||
| 12290 | R | PaeCF19ORF24245P (100% identity) | Pae01ORF12300P | |
| 12295 | HNH endonuclease signature motif containing | |||
| 12300 | M | M.PaeCF19ORF24245P (100% identity) | M.Pae01ORF12300P | |
| 12305 | S | S.PaeCF19ORF24245P (100% identity) | S.Pae01ORF12300P | |
| 12310 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 200 | DGQHR domain-containing protein | |||
| 205 | M | M.Pae5532DndEP (100% identity) | M.Pae01DndE2P | |
| 210 | DNA sulfur modification protein DndD | |||
| 205 | DNA sulfur modification protein DndE | |||
| 210 | M | M.PaeLo564DndDP (100% identity) | M.Pae01DndD2P | |
| 215 | DNA phosphorothioation system sulfurtransferase | |||
| 210 | DNA sulfur modification protein DndD | |||
| 215 | M | M.PaeLo564DndCP (100% identity) | M.Pae01DndC2P | |
| 220 | DNA sulfur modification protein DndB | |||
| 215 | DNA phosphorothioation system sulfurtransferase | |||
| 220 | M | M.PaeLo564DndBP (98% identity) | M.Pae01DndB2P | |
| 225 | 133 aa hypothetical protein | |||
| 22920 | nucleoid-associated protein YejK | |||
| 22925 | M | M.PspHORFAP (100% identity) | M.Pae01ORF22925P | |
| 22930 | Arc family DNA-binding protein | |||
| 24960 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | |||
| 24970 | M | M.Paezw26ORF5572P (100% identity) | M.Pae01ORF24970P | |
| 24975 | phage portal protein | |||
| 25190 | 208 aa hypothetical protein | |||
| 25195 | M | M.PaeZU31ORF28985P (100% identity) | M.Pae01ORF25195P | |
| 25200 | type II toxin-antitoxin system HicA family | |||
| 27360 | nucleoid-associated protein YejK | |||
| 27365 | M | M.PspAK6UORFCP (100% identity) | M.Pae01ORF27365P | |
| 27370 | Arc family DNA-binding protein | |||
| plasmid ppae01 | ||||
| 33745 | 698 aa hypothetical protein | |||
| 33750 | M | M.PpuSY153ORFAP (63% identity) | M.Pae01ORF33750P | |
| 33755 | 256 aa hypothetical protein | |||
| 33815 | DGQHR domain-containing protein | |||
| 33820 | M | M.Pae5532DndEP (100% identity) | M.Pae01DndEP | |
| 33825 | DNA sulfur modification protein DndD | |||
| 33820 | DNA sulfur modification protein DndE | |||
| 33825 | M | M.PaeLo564DndDP (100% identity) | M.Pae01DndDP | |
| 33830 | DNA phosphorothioation system sulfurtransferase | |||
| 33825 | DNA sulfur modification protein DndD | |||
| 33830 | M | M.PaeLo564DndCP (100% identity) | M.Pae01DndCP | |
| 33835 | DNA sulfur modification protein DndB | |||
| 33830 | DNA phosphorothioation system sulfurtransferase | |||
| 33835 | M | M.PaeLo564DndBP (98% identity) | M.Pae01DndBP | |
| 33840 | 133 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25625 | ATP-dependent endonuclease | |||
| 25630 | R | PspP16ORFGP (100% identity) | Pae01ORF25635P | |
| 25635 | M | M.PspP16ORFGP (100% identity) | M.Pae01ORF25635P | |
| 25640 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12305 | restriction endonuclease subunit S | |||
| 12310 | R | PaeCF19GmrSD2P (100% identity) | Pae01GmrSDP | |
| 12315 | anti-phage ZorAB system protein ZorA | |||
| 28565 | MarR family transcriptional regulator | |||
| 28570 | R | PaeSH15MrrP (100% identity) | Pae01MrrP | |
| 28575 | class I SAM-dependent DNA methyltransferase | |||