Escherichia coli RSM044 |
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Putative Escherichia coli RSM044 RM systems
Ref: Maghembe,R.S. et al. unpublished
REBASE ref # 37404
Complete sequence: 5,084,965 bp
GenBank #: CP133101
REBASE acronym: EcoM044
Org_num: 71265
All begin RB291_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 315 | transposase | |||
| 320 | R | EhoEh60ORF13695P (97% identity) | EcoM044ORF320P | |
| 325 | SprT family zinc-dependent metalloprotease | |||
| 24340 | M48 family metallopeptidase | |||
| 24345 | M | M.Ecostr10ORF18570P (100% identity) | M.EcoM044ORF24345P | |
| 24350 | S | S.Ecostr10ORF18570P (100% identity) | S.EcoM044ORF24345P | |
| 24355 | 61 aa hypothetical protein | |||
| 24965 | restriction endonuclease | |||
| 24970 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoM044ORF24970P |
| 24975 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoM044ORF24970P |
| 24980 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoM044ORF24970P |
| 24985 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2660 | NinE family protein | |||
| 2665 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoM044ORF2665P |
| 2670 | recombination protein NinB | |||
| 5395 | McrC family protein | |||
| 5400 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoM044ORF5405P |
| 5405 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoM044ORF5405P |
| 5410 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoM044ORF5405P |
| 5415 | IS3 family transposase | |||
| 6360 | 273 aa hypothetical protein | |||
| 6365 | M | M.EfeC18ORF7705P (100% identity) | GATC | M.EcoM044ORF6365P |
| 6370 | TraR/DksA family transcriptional regulator | |||
| 18260 | phosphohydrolase | |||
| 18265 | M | M.SflN116DcmP (99% identity) | CCWGG | M.EcoM044DcmP |
| 18270 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoM044DcmP |
| 18275 | drug/metabolite exporter YedA | |||
| 22855 | cell division protein DamX | |||
| 22860 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoM044DamP |
| 22865 | ribulose-phosphate 3-epimerase | |||
| 23475 | DUF2556 family protein | |||
| 23480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoM044ORF23480P |
| 23485 | DNA-binding transcriptional regulator Fis | |||
| 24285 | BREX system P-loop protein BrxC | |||
| 24290 | RM | Ecoppa10ORF1735P (78% identity) | EcoM044ORF24290P | |
| 24295 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5385 | glycosyltransferase family 2 protein | |||
| 5390 | R | EcosS9McrBP (76% identity) | EcoM044McrBP | |
| 5395 | R | EcosS9McrCP (100% identity) | EcoM044McrCP | |
| 5400 | Alw26I/Eco31I/Esp3I family type II restriction | |||