Geobacillus proteiniphilus T-6 |
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Putative Geobacillus proteiniphilus T-6 RM systems
Ref: Shulami,S. and Shoham,Y. unpublished
REBASE ref # 37412
Complete sequence: 3,670,946 bp
GenBank #: CP133076
REBASE acronym: GprT6
Org_num: 71268
All begin RA955_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3425 | DDE-type integrase/transposase/recombinase | |||
| 3430 | S | S.GspMY01ORF4205P (17% identity) | S.GprT6ORF3435P | |
| 3435 | M | M.GspMY01ORF4205P (100% identity) | M.GprT6ORF3435P | |
| 3440 | restriction endonuclease-like protein | |||
| 3925 | 327 aa hypothetical protein | |||
| 3930 | M | M1.Gst60134ORF5920P (100% identity) | M1.GprT6ORF3930P | |
| 3935 | M | M2.Gst60134ORF5920P (100% identity) | M2.GprT6ORF3930P | |
| 3940 | S | S.Gst53ORF4810P (100% identity) | S.GprT6ORF3930P | |
| 3945 | R | Gst53ORF4810P (100% identity) | GprT6ORF3930P | |
| 3950 | 261 aa hypothetical protein | |||
| 9555 | DDE-type integrase/transposase/recombinase | |||
| 9560 | S | S.GspMY01ORF4205P (83% identity) | S.GprT6ORF9560P | |
| 9565 | R | GspMY01ORF4205P (38% identity) | GprT6ORF9560AP | |
| 9570 | IS4 family transposase | |||
| 9575 | R | GspMY01ORF4205P (62% identity) | GprT6ORF9560BP | |
| 9580 | IS110-like element ISGka2 family transposase | |||
| 9585 | R | GsuE551ORF13180P (50% identity) | GprT6ORF9560CP | |
| 9590 | UvrD-helicase domain-containing protein | |||
| 14335 | Rpn family recombination-promoting | |||
| 14340 | R | Gst60133ORF1945P (98% identity) | GprT6ORF14350P | |
| 14345 | S | S.Gth734ORF5420P (98% identity) | S.GprT6ORF14350P | |
| 14350 | M | M.GthN7ORF12180P (92% identity) | M.GprT6ORF14350P | |
| 14355 | IS4 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5260 | 57 aa hypothetical protein | |||
| 5265 | M | M.GthV0DndD2P (99% identity) | M.GprT6DndDP | |
| 5270 | 123 aa hypothetical protein | |||
| 5270 | 123 aa hypothetical protein | |||
| 5275 | M | M.PcaKH35DndAP (80% identity) | M.GprT6DndAP | |
| 5280 | DNA sulfur modification protein DndE | |||
| 5275 | cysteine desulfurase family protein | |||
| 5280 | M | M.GthV0DndEP (92% identity) | M.GprT6DndEP | |
| 5285 | DNA sulfur modification protein DndD | |||
| 5280 | DNA sulfur modification protein DndE | |||
| 5285 | M | M.GthV0DndDP (98% identity) | M.GprT6DndD2P | |
| 5290 | DNA phosphorothioation system sulfurtransferase | |||
| 5285 | DNA sulfur modification protein DndD | |||
| 5290 | M | M.GthV0DndCP (99% identity) | M.GprT6DndCP | |
| 5295 | MFS transporter | |||