Parabacteroides distasonis GP102 |
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Putative Parabacteroides distasonis GP102 RM systems
Ref: Kim,S.G. et al. unpublished
REBASE ref # 37311
Complete sequence: 5,387,833 bp
GenBank #: CP132899
REBASE acronym: PdiGP102
Org_num: 71305
All begin Q8809_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11820 | 187 aa hypothetical protein | |||
| 11825 | S | S2.Bfr89ORF10375P (54% identity) | S4.PdiGP102ORF11850P | |
| 11830 | S | S3.PmeBin22ORFGP (72% identity) | S3.PdiGP102ORF11850P | |
| 11840 | S | S2.AseJC50ORF10335P (88% identity) | S2.PdiGP102ORF11850P | |
| 11845 | S | S1.Bfr4096BORF16140P (97% identity) | S1.PdiGP102ORF11850P | |
| 11850 | M | M.Psp1327ORF8735P (74% identity) | M.PdiGP102ORF11850P | |
| 11855 | R | Psp1327ORF8735P (67% identity) | PdiGP102ORF11850P | |
| 11860 | C | C.Bfr4096BORF16140P (98% identity) | C.PdiGP102ORF11850P | |
| 11865 | 251 aa hypothetical protein | |||
| 12785 | DUF6078 family protein | |||
| 12790 | R | Pdi3ORF12515P (100% identity) | PdiGP102ORF12805P | |
| 12795 | S | S.Pdi3ORF12515P (98% identity) | S.PdiGP102ORF12805P | |
| 12800 | AAA family ATPase | |||
| 12805 | M | M.PdiS2PDORF3410P (100% identity) | M.PdiGP102ORF12805P | |
| 12810 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4120 | helix-turn-helix transcriptional regulator | |||
| 4125 | R | Bfr43858ORF8930P (63% identity) | PdiGP102ORF4130P | |
| 4130 | M | M.Bfr43858ORF8930P (63% identity) | M.PdiGP102ORF4130P | |
| 4135 | helix-turn-helix transcriptional regulator | |||
| 7305 | conjugal transfer protein TraO | |||
| 7310 | M | M.Pdi3ORF7040P (100% identity) | M.PdiGP102ORF7310P | |
| 7315 | DUF3872 domain-containing protein | |||
| 9110 | diphosphate--fructose-6-phosphate | |||
| 9115 | RM | PmeBin29ORFCP (99% identity) | PdiGP102ORF9115P | |
| 9120 | TlpA disulfide reductase family protein | |||
| 12685 | 125 aa hypothetical protein | |||
| 12690 | M | M.PdiPC19ORF15190P (92% identity) | M.PdiGP102ORF12690P | |
| 12695 | S-adenosylmethionine decarboxylase | |||
| 15560 | DUF6383 domain-containing protein | |||
| 15565 | M | M.PspCT06II (100% identity) | CCWGG | M.PdiGP102ORF15565P |
| 15570 | helix-turn-helix domain-containing protein | |||
| 15575 | R | PspCT06IIP (100% identity) | CCWGG | PdiGP102ORF15565P |
| 15580 | PCMD domain-containing protein | |||
| 17645 | fructose-6-phosphate aldolase | |||
| 17650 | M | M.Pdi3ORF16915P (99% identity) | CGCG | M.PdiGP102ORF17650P |
| 17655 | outer membrane beta-barrel protein | |||
| 19330 | PD-(D/E)XK motif protein | |||
| 19335 | R | PmeBin10ORFCP (100% identity) | PdiGP102ORF19345P | |
| 19340 | ATP-binding protein | |||
| 19345 | M | M.PmeBin10ORFCP (92% identity) | M.PdiGP102ORF19345P | |
| 19350 | C | C.Bdo12C06ORF3907P (100% identity) | C.PdiGP102ORF19345P | |
| 19355 | efflux RND transporter permease subunit | |||