Citrobacter freundii RSM030 |
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Putative Citrobacter freundii RSM030 RM systems
Ref: Maghembe,R.S. et al. unpublished
REBASE ref # 37404
| Sequence length: | GenBank #: | |
| Chromosome: | 4,755,160 bp | CP133060 |
| plasmid pRSM030_p1: | 79,127 bp | CP133061 |
| plasmid pRSM030_p2: | 28,071 bp | CP133062 |
REBASE acronym: Cfr030
Org_num: 71239
All begin RBT00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20320 | toll/interleukin-1 receptor domain-containing | |||
| 20325 | M | M.Eco9018I (99% identity) | M.Cfr030ORF20325P | |
| 20330 | S | S.Eco9018I (94% identity) | S.Cfr030ORF20325P | |
| 20335 | DUF4268 domain-containing protein | |||
| 20340 | R | CspNIH10IP (98% identity) | Cfr030ORF20325P | |
| 20345 | ParA family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6405 | DUF2556 family protein | |||
| 6410 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.Cfr030ORF6410P |
| 6415 | DNA-binding transcriptional regulator Fis | |||
| 12850 | 59 aa hypothetical protein | |||
| 12855 | M | M.Cbr1421ORF4880P (96% identity) | M.Cfr030ORF12855P | |
| 12860 | DUF1317 family protein | |||
| 15900 | phosphohydrolase | |||
| 15905 | M | M.Cfrz4ORF9245P (100% identity) | CCWGG | M.Cfr030ORF15905P |
| 15910 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr030ORF15905P | |
| 15915 | drug/metabolite exporter YedA | |||
| plasmid pRSM030_p1 | ||||
| 23190 | 155 aa hypothetical protein | |||
| 23195 | M | M.Eko2020ORF25140P (99% identity) | M.Cfr030ORF23195P | |
| 23200 | 60 aa hypothetical protein | |||
| plasmid pRSM030_p2 | ||||
| 23525 | IS1 family transposase | |||
| 23530 | RM | KpnP0018ORF22420P (94% identity) | Cfr030ORF23535P | |
| 23535 | M | M.Eta370I (96% identity) | CTGAAG | M.Cfr030ORF23535P |
| 23540 | IS5/IS1182 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15845 | shufflon system plasmid conjugative transfer | |||
| 15850 | R | Cfr2385ORF4925P (99% identity) | GGCACC | Cfr030ORF15855P |
| 15855 | M | M.SspHRORF22130P (100% identity) | GGCACC | M.Cfr030ORF15855P |
| 15860 | SpnT protein | |||