Salmonella enterica subsp. enterica serovar 4,12:i:- CFIAFB20160237 |
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Putative Salmonella enterica subsp. enterica serovar 4,12:i:- CFIAFB20160237 RM systems
Ref: Hodges,L.M. et al. unpublished
REBASE ref # 37426
| Sequence length: | GenBank #: | |
| Chromosome: | 4,860,453 bp | CP132950 |
| plasmid unnamed: | 114,295 bp | CP132951 |
REBASE acronym: Sen237
Org_num: 71323
All begin EZ880_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21890 | restriction endonuclease | |||
| 21895 | R | SenA242IIP (100% identity) | GAGNNNNNNRTAYG | Sen237ORF21900P |
| 21900 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen237ORF21900P |
| 21905 | S | S.Sen187SORF3983P (100% identity) | GAGNNNNNNRTAYG | S.Sen237ORF21900P |
| 21910 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4095 | cell division protein DamX | |||
| 4100 | M | M.StyTDamP (100% identity) | GATC | M.Sen237DamP |
| 4105 | ribulose-phosphate 3-epimerase | |||
| 4590 | DUF2556 family protein | |||
| 4595 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen237ORF4595P |
| 4600 | DNA-binding transcriptional regulator Fis | |||
| 11270 | PerC family transcriptional regulator | |||
| 11275 | M | M.StyUK1V (100% identity) | GATC | M.Sen237ORF11275P |
| 11280 | RusA family crossover junction | |||
| 11520 | phosphohydrolase | |||
| 11525 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen237DcmP |
| 11530 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen237DcmP |
| 11535 | drug/metabolite exporter YedA | |||
| 22050 | BREX system P-loop protein BrxC | |||
| 22055 | RM | StyUK1IV (100% identity) | GATCAG | Sen237ORF22055P |
| 22060 | AAA family ATPase | |||
| plasmid unnamed | ||||
| 23975 | 73 aa hypothetical protein | |||
| 23980 | M | M.SenA242ORF4793P (100% identity) | M.Sen237ORF23980P | |
| 23985 | 93 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19715 | small effector SsaA | |||
| 19720 | R | StyUK1IP (99% identity) | CAGAG | Sen237ORF19725P |
| 19725 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen237ORF19725P |
| 19730 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21885 | BrnT family toxin | |||
| 21890 | R | StyUK1MrrP (100% identity) | Sen237Mrr2P | |
| 21895 | type I restriction-modification system | |||