Neisseria meningitidis NIID838 |
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Putative Neisseria meningitidis NIID838 RM systems
Ref: Takahashi,H. et al. unpublished
REBASE ref # 37385
Complete sequence: 2,178,312 bp
GenBank #: AP028683
REBASE acronym: Nme838
Org_num: 71199
All begin NmNIID838_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3500 | phenylalanine--tRNA ligase subunit alpha | |||
| 3510 | V | V.NmeS4ORFGP (100% identity) | RCCGGY | V.Nme838ORF3520P |
| 3520 | M | M.NmeS4ORFGP (76% identity) | M.Nme838ORF3520P | |
| 3530 | R | NmeS4ORFGP (100% identity) | RCCGGY | Nme838ORF3520P |
| 3540 | phenylalanine--tRNA ligase subunit beta | |||
| 4410 | ADP-heptose synthase | |||
| 4420 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme838ORF4420P |
| 4430 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme838ORF4420P |
| 4440 | ADP-glyceromanno-heptose 6-epimerase | |||
| 7520 | 3-isopropylmalate dehydrogenase | |||
| 7530 | R | NmeS4ORFHP (100% identity) | GGNNCC | R1.Nme838ORF7550P |
| 7540 | R | NmeW135ORF659P (21% identity) | GGNNCC | R2.Nme838ORF7550P |
| ??? | M | M.Nme835ORF7490P (100% identity) | GGNNCC | M.Nme838ORF7550P |
| 7580 | 3-isopropylmalate dehydratase small subunit | |||
| 11740 | alanine--tRNA ligase | |||
| 11750 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme838ORF11760P |
| 11760 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme838ORF11760P |
| 11770 | 101 aa hypothetical protein | |||
| 16190 | DUF3418 domain-containing protein | |||
| ??? | V | V.NmeS4ORFFP (100% identity) | V.Nme838ORF16220P | |
| 16210 | R | NmeS4ORFFP (100% identity) | CCGG | Nme838ORF16220P |
| 16220 | M | M.NmeS4ORFFP (94% identity) | CCGG | M.Nme838ORF16220P |
| 16230 | IS30-like element IS1655 family transposase | |||
| 20340 | 61 aa hypothetical protein | |||
| 20350 | M | M.NmeM395I (100% identity) | CCTTC | M.Nme838ORF20350P |
| 20360 | 92 aa hypothetical protein | |||
| 20370 | IS30-like element IS1655 family transposase | |||
| 20380 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme838ORF20350P |
| 20390 | 123 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6360 | alpha-hydroxy acid oxidase | |||
| 6370 | R | NmeS4ORFDP (100% identity) | Nme838ORF6380P | |
| 6380 | M | M.NmeS4ORFDP (66% identity) | M.Nme838ORF6380BP | |
| 6390 | M | M.NmeS4ORFDP (21% identity) | M.Nme838ORF6380AP | |
| 6400 | tRNA pseudouridine(55) synthase TruB | |||
| 7410 | peptidylprolyl isomerase | |||
| 7420 | M | M.Nme77ORF1599P (99% identity) | M.Nme838ORF7420P | |
| 7430 | R | NmeS4ORFIP (100% identity) | Nme838ORF7420P | |
| 7440 | tRNA 2-thiocytidine(32) synthetase TtcA | |||