Xanthomonas campestris pv. campestris CFBP 9145 |
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Putative Xanthomonas campestris pv. campestris CFBP 9145 RM systems
Ref: Boyer,C. et al. Phytopathology (2023) In press
REBASE ref # 37391
Complete sequence: 5,204,395 bp
GenBank #: CP124745
REBASE acronym: Xca9145
Org_num: 71218
All begin QJS49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6040 | SprT family zinc-dependent metalloprotease | |||
| 6045 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | Xca9145ORF6065P |
| 6050 | S | S2.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | S.Xca9145ORF6065P |
| 6055 | 93 aa hypothetical protein | |||
| 6060 | BRO family protein | |||
| 6065 | M | M.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | M.Xca9145ORF6065P |
| 6070 | restriction endonuclease subunit S | |||
| 16755 | 98 aa hypothetical protein | |||
| 16760 | R | XcaSB80ORF16515P (100% identity) | Xca9145ORF16775P | |
| 16765 | S | S.XcaTJORFEP (100% identity) | S.Xca9145ORF16775P | |
| 16770 | virulence RhuM family protein | |||
| 16775 | M | M.XcaTJORFEP (100% identity) | M.Xca9145ORF16775P | |
| 16780 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10560 | AAA family ATPase | |||
| 10565 | M | M.XcaYORFEP (48% identity) | M.Xca9145ORF10565P | |
| 10570 | DNA topoisomerase III | |||
| 10620 | IS3-like element IS476 family transposase | |||
| 10625 | RM | XcaSB80ORF10635P (100% identity) | Xca9145ORF10625P | |
| 10630 | pseudomurein-binding repeat-containing protein | |||
| 10875 | DUF2220 family protein | |||
| 10880 | RM | Xca1014ORF10390P (97% identity) | Xca9145ORF10880P | |
| 10885 | AAA family ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16775 | class I SAM-dependent DNA methyltransferase | |||
| 16780 | R | XcaYMrrP (100% identity) | Xca9145MrrP | |
| 16785 | type II toxin-antitoxin system RelE/ParE family | |||
| 22545 | RluA family pseudouridine synthase | |||
| 22550 | R | XcaYMrr2P (90% identity) | Xca9145Mrr2P | |
| 22555 | topoisomerase DNA-binding C4 zinc finger | |||