Pseudomonas aeruginosa 2021CK-01678 |
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Putative Pseudomonas aeruginosa 2021CK-01678 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,288,285 bp
GenBank #: CP132113
REBASE acronym: Pae1678
Org_num: 71110
All begin L4H20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae1678ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae1678ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae1678ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae1678ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1830 | sigma 54-interacting transcriptional regulator | |||
| 1835 | R | PaeMF1ORF1540P (99% identity) | Pae1678ORF1845P | |
| 1840 | DNA recombination protein RmuC | |||
| 1845 | M | M.Pfl13852ORFAP (100% identity) | M.Pae1678ORF1845P | |
| 1850 | S | S.Pfl13852ORFAP (100% identity) | S1.Pae1678ORF1845P | |
| 1855 | 48 aa hypothetical protein | |||
| 25135 | IS3 family transposase | |||
| 25140 | R | PaeMF1ORF24740P (100% identity) | Pae1678ORF25160P | |
| 25145 | 235 aa hypothetical protein | |||
| 25150 | AAA family ATPase | |||
| 25155 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae1678ORF25160P | |
| 25160 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae1678ORF25160P | |
| 25165 | helix-turn-helix domain-containing protein | |||
| 32390 | endonuclease NucS | |||
| 32395 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S1.Pae1678ORF32400P |
| 32400 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae1678ORF32400P |
| 32405 | HNH endonuclease signature motif containing | |||
| 32410 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae1678ORF32400P |
| 32415 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1635 | 94 aa hypothetical protein | |||
| 1640 | M | M.PaesS1ORF1335P (100% identity) | M.Pae1678ORF1640P | |
| 1645 | V | V.PaesS1ORF1335P (100% identity) | V.Pae1678ORF1640P | |
| 1650 | DISARM system phospholipase D-like protein DrmC | |||
| 1660 | DISARM system helicase DrmA | |||
| 1665 | RM | PaesS1ORF1360P (100% identity) | Pae1678ORF1665P | |
| 1670 | DISARM system SNF2-like helicase DrmD | |||
| 11665 | 213 aa hypothetical protein | |||
| 11670 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae1678ORF11670P | |
| 11675 | 159 aa hypothetical protein | |||
| 23595 | nucleoid-associated protein YejK | |||
| 23600 | M | M.PspHORFAP (100% identity) | M.Pae1678ORF23600P | |
| 23605 | Arc family DNA-binding protein | |||
| 27605 | nucleoid-associated protein YejK | |||
| 27610 | M | M.PspAK6UORFCP (100% identity) | M.Pae1678ORF27610P | |
| 27615 | Arc family DNA-binding protein | |||
| 31525 | 83 aa hypothetical protein | |||
| 31530 | M | M.PaeTBCFORFBP (89% identity) | M.Pae1678ORF31530P | |
| 31535 | phosphoadenosine phosphosulfate reductase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12285 | HsdR family type I site-specific | |||
| 12290 | R | Pae973McrBP (100% identity) | Pae1678McrBP | |
| 12295 | R | Pae973McrCP (100% identity) | Pae1678McrCP | |
| 12300 | 166 aa hypothetical protein | |||