Streptomyces species Alt3 |
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Putative Streptomyces species Alt3 RM systems
Ref: Widen,T. and Larsbrink,J. unpublished
REBASE ref # 37356
| Sequence length: | GenBank #: | |
| Chromosome: | 8,355,599 bp | CP120983 |
| plasmid unnamed1: | 278,920 bp | CP120984 |
REBASE acronym: SspAlt3
Org_num: 71028
All begin P8A20_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6970 | DEAD/DEAH box helicase | |||
| 6975 | RM | Ssp150FBORF32760P (91% identity) | SspAlt3ORF6975P | |
| 8450 | DEAD/DEAH box helicase | |||
| 8455 | RM | Sps98ORF11635P (82% identity) | SspAlt3ORF8455P | |
| 8460 | 171 aa hypothetical protein | |||
| 8540 | AAA family ATPase | |||
| 8545 | M | M.Ssp213ORF7895P (100% identity) | M.SspAlt3ORF8545P | |
| 8550 | MBL fold metallo-hydrolase | |||
| 17265 | 501 aa hypothetical protein | |||
| 17270 | R | Ssp213ORF16525P (100% identity) | SspAlt3ORF17270P | |
| 17275 | CopG family transcriptional regulator | |||
| 21315 | DUF4352 domain-containing protein | |||
| 21320 | M | M.Ssp201ORF21585P (97% identity) | M.SspAlt3ORF21320P | |
| 21325 | 226 aa hypothetical protein | |||
| 22690 | HNH endonuclease | |||
| 22695 | M | M.Ssp1208ORF13450P (100% identity) | M.SspAlt3ORF22695P | |
| 22700 | V | V.Ssp1208ORF13450P (100% identity) | V.SspAlt3ORF22695P | |
| 22705 | DEAD/DEAH box helicase | |||
| 22710 | transcriptional regulator | |||
| 22715 | 201 aa hypothetical protein | |||
| 22720 | 253 aa hypothetical protein | |||
| 22725 | R | Ssp1208ORF13450P (100% identity) | SspAlt3ORF22695P | |
| 22730 | Z1 domain-containing protein | |||
| 30470 | NlpC/P60 family protein | |||
| 30475 | M | M.Ssp55ORF30690P (95% identity) | M.SspAlt3ORF30475P | |
| 30480 | transposase family protein | |||
| 30510 | 95 aa hypothetical protein | |||
| 30515 | M | M.Sca1210ORF19350P (63% identity) | M.SspAlt3ORF30515P | |
| 30520 | V | V.Smi94ORF18215P (60% identity) | V.SspAlt3ORF30515P | |
| 30525 | AbrB/MazE/SpoVT family DNA-binding | |||
| plasmid unnamed1 | ||||
| 38470 | 238 aa hypothetical protein | |||
| 38475 | RM | Kpa1269ORF32825P (87% identity) | SspAlt3ORF38475P | |
| 38480 | 104 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6950 | 306 aa hypothetical protein | |||
| 6955 | R | Kpa1344GmrSDP (99% identity) | SspAlt3GmrSDP | |
| 6960 | 172 aa hypothetical protein | |||
| 8525 | sigma-70 family RNA polymerase sigma factor | |||
| 8530 | R | Ssp201McrBP (100% identity) | SspAlt3McrB2P | |
| 8535 | R | Ssp201McrCP (100% identity) | SspAlt3McrC2P | |
| 8540 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 37545 | 358 aa hypothetical protein | |||
| 37550 | R | Ssp201McrC2P (100% identity) | SspAlt3McrCP | |
| 37555 | R | Ssp201McrB2P (100% identity) | SspAlt3McrBP | |
| 37560 | IS5 family transposase | |||