Bacillus carboniphilus SaN35-3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacillus carboniphilus SaN35-3 RM systems
Ref: Yu,S. et al. unpublished
REBASE ref # 34291
Complete sequence: 3,602,024 bp
GenBank #: CP129013
REBASE acronym: Bca3
Org_num: 70652
All begin LC087_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16500 | ISL3 family transposase | |||
| 16505 | S | S.HspR103ORF2450P (11% identity) | S.Bca3ORF16505P | |
| 16510 | R | Vsp332ORFCP (71% identity) | Bca3ORF16505P | |
| 16515 | DUF4275 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13490 | ISL3 family transposase | |||
| 13495 | R | R2.BceCer4ORF8020P (20% identity) | R1.Bca3ORF13510P | |
| ??? | R | R1.BspHNR4ORF4080P (30% identity) | R2.Bca3ORF13510P | |
| 13510 | M | M1.BsuNA05ORF920P (89% identity) | M1.Bca3ORF13510P | |
| 13515 | M | M2.BsuNA05ORF920P (90% identity) | M2.Bca3ORF13510P | |
| 13520 | transposase | |||
| 18350 | 64 aa hypothetical protein | |||
| 18355 | R | BspISO11DptFP (51% identity) | Bca3DptFP | |
| 18360 | DNA phosphorothioation-dependent restriction | |||
| 18355 | DNA phosphorothioation-dependent restriction | |||
| 18360 | R | BspISO11DptGP (47% identity) | Bca3DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 18360 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | BspISO11DptHP (60% identity) | Bca3DptHP | |
| 18375 | aminotransferase class V-fold PLP-dependent | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 18375 | M | M.Bth795DndAP (66% identity) | M.Bca3DndAP | |
| 18380 | DNA sulfur modification protein DndE | |||
| 18375 | aminotransferase class V-fold PLP-dependent | |||
| 18380 | M | M.Aps1DndEP (70% identity) | M.Bca3DndEP | |
| 18385 | DNA sulfur modification protein DndD | |||
| 18380 | DNA sulfur modification protein DndE | |||
| 18385 | M | M.Bsp48385DndDP (53% identity) | M.Bca3DndDP | |
| 18390 | DNA phosphorothioation system sulfurtransferase | |||
| 18385 | DNA sulfur modification protein DndD | |||
| 18390 | M | M.PmeAg87DndCP (68% identity) | M.Bca3DndCP | |
| 18395 | DNA sulfur modification protein DndB | |||
| 18390 | DNA phosphorothioation system sulfurtransferase | |||
| 18395 | M | M.Aps1DndBP (81% identity) | M.Bca3DndBP | |
| 18400 | 53 aa hypothetical protein | |||