Clostridium septicum WW106 |
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Putative Clostridium septicum WW106 RM systems
Ref: Kim,S.G. et al. unpublished
REBASE ref # 37275
Complete sequence: 3,439,412 bp
GenBank #: CP131445
REBASE acronym: Cse106
Org_num: 69662
All begin Q6375_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8300 | helix-turn-helix domain-containing protein | |||
| 8305 | R | CspMORF4102P (87% identity) | Cse106ORF8320P | |
| 8310 | 197 aa hypothetical protein | |||
| 8315 | CPCC family cysteine-rich protein | |||
| 8320 | M | M.CspMORF4102P (82% identity) | M.Cse106ORF8320P | |
| 8325 | IS256 family transposase | |||
| 8330 | 63 aa hypothetical protein | |||
| 8335 | transposase | |||
| 8340 | S | S.HsaGGR1ORF15155P (35% identity) | S.Cse106ORF8320P | |
| 8345 | 283 aa hypothetical protein | |||
| 13140 | 88 aa hypothetical protein | |||
| 13145 | R | Cse1044ORFEP (99% identity) | Cse106ORF13155P | |
| 13150 | S | S.VspSa110ORFCP (54% identity) | S.Cse106ORF13155P | |
| 13155 | M | M.Cch7528I (97% identity) | M.Cse106ORF13155P | |
| 13160 | YdcF family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5805 | helix-turn-helix domain-containing protein | |||
| 5810 | M | M.Csp7534ORF13355P (98% identity) | M.Cse106ORF5810P | |
| 5815 | transposase | |||
| 12315 | transposase | |||
| 12320 | M | M.Cpe2837ORF1086P (72% identity) | M.Cse106ORF12320P | |
| 12325 | DUF1998 domain-containing protein | |||
| 13285 | PadR family transcriptional regulator | |||
| 13290 | R | CspM240ORF841P (68% identity) | Cse106ORF13295P | |
| 13295 | M | M.CspM240ORF841P (80% identity) | M.Cse106ORF13295P | |
| 13300 | integrase core domain-containing protein | |||
| 15830 | pentapeptide repeat-containing protein | |||
| 15835 | M | M.Csp7534III (100% identity) | GTATAC | M.Cse106ORF15835P |
| 15840 | exonuclease domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12140 | (deoxy)nucleoside triphosphate | |||
| 12145 | R | Csp7534ORF3610P (99% identity) | Cse106ORF12145P | |
| 12150 | 324 aa hypothetical protein | |||