Neisseria gonorrhoeae NJ204705 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae NJ204705 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,239,705 bp
GenBank #: CP130892
REBASE acronym: Ngo05
Org_num: 69845
All begin Q6379_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2385 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2390 | M | M.NgoJH7ORFLP (100% identity) | M.Ngo05ORF2390P | |
| 2395 | DNA damage-inducible protein D | |||
| 2400 | S | S1.Ngo9343ORF2050P (99% identity) | GCANNNNNNNNTGC | S1.Ngo05ORF2390P |
| 2405 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo05ORF2390P |
| 2410 | R | NgoAT159ORF7305P (100% identity) | Ngo05ORF2390P | |
| 2415 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5195 | ABC transporter | |||
| 5200 | M | M.NgoWLI (99% identity) | GAGNNNNNTAC | M.Ngo05ORF5200P |
| 5205 | 279 aa hypothetical protein | |||
| 5210 | 186 aa hypothetical protein | |||
| 5215 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo05ORF5200P |
| 5220 | hydroxyacid dehydrogenase | |||
| 5225 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo05ORF5200P |
| 5230 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo05ORF35P |
| 40 | M | M.NgoWPORF8P (93% identity) | GATC | M.Ngo05ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1230 | 62 aa hypothetical protein | |||
| 1235 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo05ORF1235P |
| 1240 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo05ORF1235P |
| 1245 | excinuclease ABC subunit UvrA | |||
| 1850 | phenylalanine--tRNA ligase subunit alpha | |||
| 1855 | V | V.NgoWSORF391P (100% identity) | V.Ngo05ORF1860P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo05ORF1860P |
| 1870 | R | NgoWSORF391P (100% identity) | CCGG | Ngo05ORF1860P |
| 1875 | phenylalanine--tRNA ligase subunit beta | |||
| 2150 | IS1595 family transposase | |||
| 2155 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo05ORF2155P |
| 2160 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo05ORF2155P |
| 2165 | protein Gly1ORF1 | |||
| 2190 | Z1 domain-containing protein | |||
| 2195 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo05ORF2200P |
| 2200 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo05ORF2200P |
| 2205 | DNA repair protein RadA | |||
| 5335 | 3-isopropylmalate dehydratase small subunit | |||
| 5340 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo05ORF5340P |
| 5345 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo05ORF5340P |
| 5350 | 3-isopropylmalate dehydrogenase | |||
| 8420 | replication initiation factor domain-containing | |||
| 8425 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo05ORF8440P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo05ORF8440P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo05ORF8440P |
| 8450 | 48 aa hypothetical protein | |||
| 9975 | cysteine--tRNA ligase | |||
| 9980 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo05ORF9985P |
| 9985 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo05ORF9985P |
| 9990 | GTPase ObgE | |||
| 10515 | Tex family protein | |||
| 10520 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo05ORF10520P |
| 10525 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo05ORF10520P |
| 10530 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo05ORF10520P |
| 10535 | 93 aa hypothetical protein | |||
| 11070 | ribosome recycling factor | |||
| 11075 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo05ORF11075P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo05ORF11075P |
| 11090 | FUSC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5525 | site-specific DNA-methyltransferase | |||
| 5530 | M | M.NgoSW0259ORF3235P (100% identity) | M.Ngo05ORF5530P | |
| 5535 | R | NgoNCORF1272P (100% identity) | Ngo05ORF5530P | |
| 5540 | alpha-hydroxy acid oxidase | |||
| 5990 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5995 | R | NgoWPIIP (100% identity) | Ngo05ORF6000P | |
| 6000 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo05ORF6000P | |
| 6005 | peptidylprolyl isomerase | |||