Neisseria gonorrhoeae NJ1914215 |
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Putative Neisseria gonorrhoeae NJ1914215 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,216,433 bp
GenBank #: CP130894
REBASE acronym: Ngo5
Org_num: 69840
All begin Q6382_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 725 | replication-associated recombination protein A | |||
| 730 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo5ORF755P |
| 735 | hydroxyacid dehydrogenase | |||
| 740 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo5ORF755P |
| 745 | 186 aa hypothetical protein | |||
| 750 | 279 aa hypothetical protein | |||
| 755 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo5ORF755P |
| 760 | ABC transporter | |||
| 10920 | ADP-glyceromanno-heptose 6-epimerase | |||
| 10925 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | M.Ngo5ORF10925P |
| 10930 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GCANNNNNNNGTC | S.Ngo5ORF10925P |
| 10945 | R | NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | Ngo5ORF10925P |
| 10950 | ATP-dependent Clp protease ATP-binding subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 615 | 3-isopropylmalate dehydrogenase | |||
| 620 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo5ORF625P |
| 625 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo5ORF625P |
| 630 | 3-isopropylmalate dehydratase small subunit | |||
| 1885 | anthranilate synthase component I | |||
| 1890 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo5ORF1890P |
| 1895 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo5ORF1890P |
| 1900 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3230 | replication initiation factor domain-containing | |||
| 3235 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo5ORF3250P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo5ORF3250P |
| 3250 | M | M.Ngo690ORF5775BP (100% identity) | M.Ngo5ORF3250BP | |
| 3255 | M | M.NgoD159ORF475AP (100% identity) | M.Ngo5ORF3250AP | |
| 3260 | 48 aa hypothetical protein | |||
| 3450 | excinuclease ABC subunit UvrA | |||
| 3455 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo5ORF3460P |
| 3460 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo5ORF3460P |
| 3465 | 62 aa hypothetical protein | |||
| 6710 | FUSC family protein | |||
| 6715 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo5ORF6720P |
| 6720 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo5ORF6720P |
| 6725 | ribosome recycling factor | |||
| 7265 | 93 aa hypothetical protein | |||
| 7270 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo5ORF7275P |
| 7275 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo5ORF7275P |
| 7280 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo5ORF7275P |
| 7285 | Tex family protein | |||
| 7830 | GTPase ObgE | |||
| 7835 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo5ORF7835P |
| 7840 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo5ORF7835P |
| 7845 | cysteine--tRNA ligase | |||
| 8885 | leucine--tRNA ligase | |||
| 8890 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo5ORF8890P |
| 8895 | site-specific DNA-methyltransferase | |||
| 8890 | DpnI domain-containing protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo5ORFAP |
| 8900 | 184 aa hypothetical protein | |||
| 10680 | IS1595 family transposase | |||
| 10685 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo5ORF10685P |
| 10690 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo5ORF10685P |
| 10695 | protein Gly1ORF1 | |||
| 10720 | Z1 domain-containing protein | |||
| 10725 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo5ORF10730P |
| 10730 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo5ORF10730P |
| 10735 | 90 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 430 | alpha-hydroxy acid oxidase | |||
| 435 | R | Ngo9ORF1715P (100% identity) | GCAGA | Ngo5ORF440P |
| 440 | M | M.Ngo6140ORF494P (99% identity) | GCAGA | M.Ngo5ORF440P |
| 445 | tRNA pseudouridine(55) synthase TruB | |||
| 11680 | peptidylprolyl isomerase | |||
| 11685 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo5ORF11685P | |
| 11690 | R | Ngos1291ORF8455P (100% identity) | Ngo5ORF11685P | |
| 11695 | tRNA 2-thiocytidine(32) synthetase TtcA | |||