Neisseria gonorrhoeae NJ1913940 |
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Putative Neisseria gonorrhoeae NJ1913940 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,213,791 bp
GenBank #: CP130895
REBASE acronym: Ngo40
Org_num: 69839
All begin Q6388_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2065 | M | M.NgoJH7ORFLP (100% identity) | M.Ngo40ORF2065P | |
| 2070 | DNA damage-inducible protein D | |||
| 2075 | S | S1.NgoWSII (99% identity) | GCANNNNNNNNTGC | S1.Ngo40ORF2065P |
| 2080 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo40ORF2065P |
| 2085 | R | NgoWNIIP (100% identity) | Ngo40ORF2065P | |
| 2090 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3575 | replication-associated recombination protein A | |||
| 3580 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo40ORF3605P |
| 3585 | hydroxyacid dehydrogenase | |||
| 3590 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo40ORF3605P |
| 3595 | 186 aa hypothetical protein | |||
| 3600 | 279 aa hypothetical protein | |||
| 3605 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo40ORF3605P |
| 3610 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo40ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | DpnI domain-containing protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo40ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1525 | phenylalanine--tRNA ligase subunit alpha | |||
| 1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo40ORF1535P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo40ORF1535P |
| 1545 | R | NgoWSORF391P (100% identity) | CCGG | Ngo40ORF1535P |
| 1550 | phenylalanine--tRNA ligase subunit beta | |||
| 1825 | IS1595 family transposase | |||
| 1830 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo40ORF1830P |
| 1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo40ORF1830P |
| 1840 | protein Gly1ORF1 | |||
| 1865 | Z1 domain-containing protein | |||
| 1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo40ORF1875P |
| 1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo40ORF1875P |
| 1880 | DNA repair protein RadA | |||
| 3465 | 3-isopropylmalate dehydrogenase | |||
| 3470 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo40ORF3475P |
| 3475 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo40ORF3475P |
| 3480 | 3-isopropylmalate dehydratase small subunit | |||
| 6075 | replication initiation factor domain-containing | |||
| 6080 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo40ORF6095P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo40ORF6095P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo40ORF6095P |
| 6105 | type IV pilin protein | |||
| 6290 | excinuclease ABC subunit UvrA | |||
| 6295 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo40ORF6300P |
| 6300 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo40ORF6300P |
| 6305 | 62 aa hypothetical protein | |||
| 9540 | FUSC family protein | |||
| 9545 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo40ORF9550P |
| 9550 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo40ORF9550P |
| 9555 | ribosome recycling factor | |||
| 10090 | 93 aa hypothetical protein | |||
| 10095 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo40ORF10100P |
| 10100 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo40ORF10100P |
| 10105 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo40ORF10100P |
| 10110 | Tex family protein | |||
| 10655 | GTPase ObgE | |||
| 10660 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo40ORF10660P |
| 10665 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo40ORF10660P |
| 10670 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2815 | peptidylprolyl isomerase | |||
| 2820 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo40ORF2820P | |
| 2825 | R | Ngos1291ORF8455P (100% identity) | Ngo40ORF2820P | |
| 2830 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3285 | alpha-hydroxy acid oxidase | |||
| 3290 | R | NgoWPORF742P (99% identity) | GCAGA | Ngo40ORF3295P |
| 3295 | M | M.Ngo56ORF11615P (100% identity) | GCAGA | M.Ngo40ORF3295P |
| 3300 | tRNA pseudouridine(55) synthase TruB | |||