Neisseria gonorrhoeae NJ197542 |
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Putative Neisseria gonorrhoeae NJ197542 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,216,731 bp
GenBank #: CP130897
REBASE acronym: Ngo2
Org_num: 69844
All begin Q6387_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2070 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | M.Ngo2ORF2070P |
| 2075 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoTFGB2ORFAP (100% identity) | GCANNNNNNNGTC | S.Ngo2ORF2070P |
| 2090 | R | NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | Ngo2ORF2070P |
| 2095 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3590 | replication-associated recombination protein A | |||
| 3595 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo2ORF3620P |
| 3600 | hydroxyacid dehydrogenase | |||
| 3605 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo2ORF3620P |
| 3610 | 186 aa hypothetical protein | |||
| 3615 | 279 aa hypothetical protein | |||
| 3620 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo2ORF3620P |
| 3625 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo2ORF35P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo2ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.Ngo2ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo2ORF1540P |
| 1550 | R | NgoWSORF391P (100% identity) | CCGG | Ngo2ORF1540P |
| 1555 | phenylalanine--tRNA ligase subunit beta | |||
| 1830 | IS1595 family transposase | |||
| 1835 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo2ORF1835P |
| 1840 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo2ORF1835P |
| 1845 | protein Gly1ORF1 | |||
| 1870 | Z1 domain-containing protein | |||
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo2ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo2ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3480 | 3-isopropylmalate dehydrogenase | |||
| 3485 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo2ORF3490P |
| 3490 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo2ORF3490P |
| 3495 | 3-isopropylmalate dehydratase small subunit | |||
| 6115 | replication initiation factor domain-containing | |||
| 6120 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo2ORF6135P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo2ORF6135P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo2ORF6135P |
| 6145 | type IV pilin protein | |||
| 6330 | excinuclease ABC subunit UvrA | |||
| 6335 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo2ORF6340P |
| 6340 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo2ORF6340P |
| 6345 | 62 aa hypothetical protein | |||
| 9595 | FUSC family protein | |||
| 9600 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo2ORF9605P |
| 9605 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo2ORF9605P |
| 9610 | ribosome recycling factor | |||
| 10145 | 93 aa hypothetical protein | |||
| 10150 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo2ORF10155P |
| 10155 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo2ORF10155P |
| 10160 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo2ORF10155P |
| 10165 | Tex family protein | |||
| 10705 | GTPase ObgE | |||
| 10710 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo2ORF10710P |
| 10715 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo2ORF10710P |
| 10720 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2825 | peptidylprolyl isomerase | |||
| 2830 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo2ORF2830P | |
| 2835 | R | Ngos1291ORF8455P (100% identity) | Ngo2ORF2830P | |
| 2840 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3295 | alpha-hydroxy acid oxidase | |||
| 3300 | R | NgoSH240ORFJP (100% identity) | GCAGA | Ngo2ORF3305P |
| ??? | M | M.NgoSH204ORFKP (100% identity) | GCAGA | M.Ngo2ORF3305P |
| 3315 | tRNA pseudouridine(55) synthase TruB | |||