Neisseria gonorrhoeae NJ208756 |
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Putative Neisseria gonorrhoeae NJ208756 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 37289
Complete sequence: 2,214,541 bp
GenBank #: CP130890
REBASE acronym: Ngo56
Org_num: 69847
All begin Q6384_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1125 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1130 | R | NgoWNIIP (100% identity) | Ngo56ORF1150P | |
| 1135 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo56ORF1150P |
| 1140 | S | S1.Ngo40ORF2065P (99% identity) | GCANNNNNNNNTGC | S1.Ngo56ORF1150P |
| 1145 | DNA damage-inducible protein D | |||
| 1150 | M | M.NgoJH7ORFLP (100% identity) | M.Ngo56ORF1150P | |
| 1155 | ADP-glyceromanno-heptose 6-epimerase | |||
| 11300 | ABC transporter | |||
| 11305 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo56ORF11305P |
| 11310 | 279 aa hypothetical protein | |||
| 11315 | 186 aa hypothetical protein | |||
| 11320 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo56ORF11305P |
| 11325 | hydroxyacid dehydrogenase | |||
| 11330 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo56ORF11305P |
| 11335 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1335 | DNA repair protein RadA | |||
| 1340 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo56ORF1340P |
| 1345 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo56ORF1340P |
| 1350 | Z1 domain-containing protein | |||
| 1375 | protein Gly1ORF1 | |||
| 1380 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo56ORF1385P |
| 1385 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo56ORF1385P |
| 1390 | IS1595 family transposase | |||
| 1660 | phenylalanine--tRNA ligase subunit beta | |||
| 1665 | R | NgoWSORF391P (100% identity) | CCGG | Ngo56ORF1670P |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo56ORF1670P |
| 1680 | V | V.NgoWSORF391P (100% identity) | V.Ngo56ORF1670P | |
| 1685 | phenylalanine--tRNA ligase subunit alpha | |||
| 3165 | 184 aa hypothetical protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo56ORF3170P |
| 3175 | DpnI domain-containing protein | |||
| 3170 | site-specific DNA-methyltransferase | |||
| 3175 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo56ORF3175P |
| 3180 | leucine--tRNA ligase | |||
| 4230 | cysteine--tRNA ligase | |||
| 4235 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo56ORF4240P |
| 4240 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo56ORF4240P |
| 4245 | GTPase ObgE | |||
| 4790 | Tex family protein | |||
| 4795 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo56ORF4795P |
| 4800 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo56ORF4795P |
| 4805 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo56ORF4795P |
| 4810 | 93 aa hypothetical protein | |||
| 5345 | ribosome recycling factor | |||
| 5350 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo56ORF5350P |
| 5355 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo56ORF5350P |
| 5360 | FUSC family protein | |||
| 8460 | 62 aa hypothetical protein | |||
| 8465 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo56ORF8465P |
| 8470 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo56ORF8465P |
| 8475 | excinuclease ABC subunit UvrA | |||
| 8660 | type IV pilin protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo56ORF8665P |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo56ORF8665P |
| 8685 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo56ORF8665P | |
| 8690 | replication initiation factor domain-containing | |||
| 11430 | 3-isopropylmalate dehydratase small subunit | |||
| 11435 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo56ORF11435P |
| 11440 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo56ORF11435P |
| 11445 | 3-isopropylmalate dehydrogenase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 380 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 385 | R | Ngos1291ORF8455P (100% identity) | Ngo56ORF390P | |
| 390 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo56ORF390P | |
| 395 | peptidylprolyl isomerase | |||
| 11610 | tRNA pseudouridine(55) synthase TruB | |||
| 11615 | M | M.Ngo40ORF3295P (100% identity) | GCAGA | M.Ngo56ORF11615P |
| 11620 | R | Ngo40ORF3295P (99% identity) | GCAGA | Ngo56ORF11615P |
| 11625 | alpha-hydroxy acid oxidase | |||